| Annotation |
|---|
| Description | jgi|Araly1|930126|scaffold_302583.1 |
| Sequence |
CAGGTTGATT TGGAAAAATA ATGGATCAAT CTCTGGAGCA TCAAACTCAA ACACATGACC AAGAGGACGA AATAGTTACT GAAGGAAGTG CTGTTGTGCA TGGTGAGCCT TCTCAAGATG GTAGTGTTCC TCCTAAAGTT GATAGTGAAG CTGAGGTTTT GGATGAGAAA GTCAGTAAGC AGATCATAAA GGAAGGTCAT GGTTCCAAAC CATCCAAGTA CTCGACATGC TTTTTACACT ATAGGGCATG GACCAAAAAT TCGCAGCATA AATTTGAAGA TACATGGCAA GAGCAGCAAC CTATTGAATT GGTTCTTGGA AAAGAGAAAA AAGAATTGGC CGGTTTGGCC ATCGGTGTTT CTAGCATGAA GTCTGGTGAA CGTGCGCTTG TGCATGTTGG CTGGGAATTG GCTTATGGGA AAGAAGGAAA CTTTTCTTTT CCGAATGTTC CACCTATGGC GGACTTGTTG TATGAGGTTG AAGTTATTGG ATTTGATGAA ACAAAGGAGG GAAAGGCTCG CAGTGATATG ACTGTGGAGG AAAGGATTGG TGCAGCAGAC AGAAGAAAAA TGGATGGAAA TTCTCTGTTT AAGGAGGAGA AACTGGAGGA GGCCATGCAA CAGTATGAAA TGGCCATAGC ATACATGGGG GACGATTTTA TGTTTCAGCT GTATGGGAAG TATCAGGATA TGGCTTTAGC AGTTAAAAAC CCATGCCACC TAAACATAGC AGCTTGCCTC ATCAAGCTAA AACGATACGA TGAAGCAATT GGTCACTGCA ACATTGTGTT GACAGAAGAA GAGAAAAACC CAAAAGCACT GTTCAGAAGA GGGAAGGCAA AGGCAGAGCT AGGACAAATG GACTCAGCAC GTGATGATTT CCGAAAGGCG CAAAAGTATG CTCCTGATGA CAAGGCGATT AGAAGAGAGC TACGAGCACT TGCAGAGCAA GAGAAAGCTT TGTACCAAAA GCAGAAAGAA ATGTACAAAG GAATATTCAA AGGGAAAGAA GAAGGCGGTG CCAAGGCAAT GAGCCGTAAC TGGTTGATAC TGTTATGGCA ATGGTTGGTT TCCCTTTTCT CCCGGATCTT TCGACGCCAC AGAGTTAAAG CAGATTGATG AGGTATGAAG CTTGACACT |
| Length | 1139 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_3: 9036260.. 9038457 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT3G21640.1 |
| Description | FKBP-type peptidyl-prolyl cis-trans isomerase family protein |
| TAIR curator summary | encodes a 42 kDa FK506-binding protein (AtFKBP42) that possesses similarity to multidomain peptidyl-prolyl cis/trans isomerases (PPIases, EC 5.2.1.8), which are known to be components of mammalian steroid hormone receptor complexes. The protein appears to be localized to the plasma membrane by electron microscopy and binds to HSP90.1 and calmodulin in vitro. It also aggregates citrate synthase in vitro but does NOT show PPIase activity in vivo. Mutants are reduced in size and exhibit disoriented growth in all organs. |
| Alias | [ATFKBP42][FKBP42][TWD1][UCU2][FK506-BINDING PROTEIN 42][TWISTED DWARF 1][ULTRACURVATA 2] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 9.16515 |
Ahg923884 | Disease resistance protein (CC-NBS-LRR class) family |
| 9.16515 |
Ahg478587 | TGACG motif-binding factor 6 |
| 10 |
Ahg473277 | Homeobox-leucine zipper family protein / lipid-binding START domain-containing protein |
| 14.6969 |
Ahg489300 | inositol requiring 1-1 |
| 15.7162 |
Ahg950284 | WRKY DNA-binding protein 2 |
| 16.7929 |
Ahg328661 | Class I glutamine amidotransferase-like superfamily protein |
| 22.0454 |
Ahg894082 | |
| 22.4499 |
Ahg942571 | APR-like 6 |
| 22.6716 |
Ahg474047 | stomatal cytokinesis defective / SCD1 protein (SCD1) |
| 23.3666 |
Ahg475111 | O-fucosyltransferase family protein |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
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| The four seasons |
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| Growth Chamber expression |
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