Detail



ID : Ahg930154

Blast(Query) A.halleri   /   A.thaliana (NOT RECIPROCAL)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|930154|scaffold_302611.1
Sequence
TCATCATGCA TTGTCCAAGT ATGGAGCCAA AGTGTGACCA CTGTGCAACT TCACAAGCAG TGATTTACTG CAAATCCGAT TTGGCTAAAC TATGCCAAAA CTGCGACTTC CACGTACACT CTGCGAATCC TCTATCTCAT AGACACTCAC GCTCTTTGAT CTGCCAGAAA TGCTTCTCAC AGCCAGCCGT AATCCGCTGT CTCGGTGAGA AGGTTTCATA TTGCCAAAGA TGTCATTGGC ACGCAAGCAA CTGCTCGGAT TTAGGACACA GAGTTCAGAG GTTGAACCCT TTCTCTGGTT GTCCTTCTCC AACAGATTTT GTCAAAATGT GGTCTTCAAT TCTTGAACCT TCTGTCTCTA GTTTGGTTAG TCCGTTTGTT GGTTCTTTGC CCTTGAATGA TCCCAATAAT ACCATGTTTG GAATGGCGAA AATCAACGAA TTAGACGGTT TGATCGGTTC CCCTTATTCC ATGGTGCCAC ACAGCTTCAA TGTCACTCAG AATTTCAGTG ATCAATTGTC TTTCTTTTCC GTGGAATCTA AGGGATATCC TGATTTGGTT CTTAAACTTG AAGAAGGCGA AGAAGATTTA TGTGAAGGGC TTAACTTTGA CAATGCGCCG TTAAACTTTG ACGTTGGAGA TGATATTATC GGATGTTCTT TAGAAGAACC CATAGAACCG GACCATACAG TACCAAATTG CCTACTGATC GACAAGAATA ACACATCCGT TACCGCCTCA AACTTTACTA TAGACAAGGC TTTTGAGGCA TCGTCACCAG GACAACAAAT GAACATCAAC ACTGGACTTC CGCTTCCTCT ATCACCTGTC TTGTTCGGAC AAATCCATCC ATCGCTTAAC ATCTCCAACG TCACAGGTGA AAGCAATGCA GCTGATTACC AGGATTGTGG GATGCCTCCA GGGTTTATAA CGAGTGAAGC ACCATGGGAA TCGAATCTTG AAGTTAGTTG TCCACAAGCA AGTACTCAAG CTAAATTGAG ATACATGGAG AAGAAATTAA GCGCTCCAAG AGCTGACACG AGGAAAAGAG TGAAAGGAAG ATTTGTGAAA GCTGGTGACA ATTATGATTA TGACCCATCA TCACCGACGA CAAACAATTG AAATTTACAA AAAATAATGT A 
Length1141
Protein Sequence
Protein Residue
Map Locationscaffold_3: 9143202.. 9144615
Download Sequence
A.thaliana
AGI-codeAT3G21880.1
DescriptionB-box type zinc finger protein with CCT domain
TAIR curator summary
Alias[BBX10][B-box domain protein 10]
Gene coexpression
MR
MR Locus Description
4.69042 Ahg474556
4.69042 Virus0558
6 Ahg942245
8.12404 Ahg331298 transposable element gene
8.83176 Ahg937316
9.38083 Ahg929729 iaa-leucine resistant 2
13.4907 Ahg908199 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
13.5647 Virus0360
13.6382 Ahg927190 Plant protein of unknown function (DUF869)
13.7477 Ahg315984
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression