| Annotation |
|---|
| Description | jgi|Araly1|930199|scaffold_302656.1 |
| Sequence |
TTCCTCAGCT CCTCAAATCA GAATGAATCA ATCCGAGCAC AATGACTTTT CCGGTACAGT GCAAAAACCT TCAGAGACTT CATCAGAGTC GTCGTACACA AGTCCTCCGC CGCCAATTGG TTATCCGACT AGAGATGCGG TGGTCGGTGA TCCTCCGGCA GTAGCAACGG AGACTAAGTC CAAGAACCTC GAAGAAACAG TCAAGATATG CAGTTGTTTG GGGGCATGTT GCACTTTTTT GACGGCATGT TGCAATTTTC TTACGTGCGT ATCAGGATGA TGAGACTGAA GTCGTTGTTG A |
| Length | 301 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_3: 9312819.. 9319191 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT3G22231.1 |
| Description | pathogen and circadian controlled 1 |
| TAIR curator summary | Encodes a member of a novel 6 member Arabidopsis gene family. Expression of PCC1 is regulated by the circadian clock and is upregulated in response to both virulent and avirulent strains of Pseudomonas syringae pv. tomato. |
| Alias | [PCC1][PATHOGEN AND CIRCADIAN CONTROLLED 1] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 2 |
Ahg473540 | Protein of unknown function (DUF567) |
| 2.44949 |
Ahg930202 | pathogen and circadian controlled 1 |
| 2.44949 |
Ahg930201 | |
| 7.07107 |
Ahg488808 | Glycoprotein membrane precursor GPI-anchored |
| 8.7178 |
Ahg906183 | basic pathogenesis-related protein 1 |
| 10.583 |
Ahg473621 | ECS1 |
| 11.225 |
Ahg921474 | |
| 16.4317 |
Ahg921441 | |
| 25.3969 |
Ahg889845 | cysteine-rich RLK (RECEPTOR-like protein kinase) 16 |
| 26.6083 |
Ahg347816 | Leucine-rich repeat protein kinase family protein |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
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| The four seasons |
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| Growth Chamber expression |
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