Detail



ID : Ahg930444

Blast(Query) A.halleri   /   A.thaliana (NOT RECIPROCAL)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|930444|scaffold_302901.1
Sequence
TCTCTCCCTA ATATCTCTGG AGATGGAAAT GAGTTTTACA ATTCATGTTC CGGCTGGTTG TCAGTTTACA ATTAACGTTA AACCAGTTGT CGGACTCGTA CCACCGGCTG GTGGAGGTGG TGGCGGATTA AACGTTAATG TTCATCCTCC GGCTGGTGGC GTTGAACAAG TTAAGGATGA ACCCCTCATA GTAGAAACCT CTAACCTTAC TGATCCATCT TTGAAAATGG CTAACCCTAA AGTTTTCTTT GATATGTCCG TTGGTGGCAA ACCGGCTGGT CGGATCGTGA TAGAGCTCTT TGCCCACACG ACCCCACGGA CGGCGGAGAA CTTCCGAGCC CTCTGTACTG GCGAGAAAGG CATGGGGAAA TGTGGTAAGC CACTCCACTA CAAGGGATCA ATCATCCACC GTCTGGTTCC CGATCAAATG TTATGTGGAG GAGATATCAC TGCTGGTGAC GGATCCGGAG GGGAATCAAT CTATGGGGAC AGATTTTTCG AGGATGAGAA CTTCATCAAT AAGCAAACAG GTCCAGGTAT CCTCGCCATG GCTAACCGTG GTATTGACAC CAACGAATCT CAGTTCATGA TTTGCATGGA GGGGAGCCCT ATTATCGATA CTGAGCATGT TGTGTTCGGC CATGTTGTTG AAGGATTGGA TGTGATCAGG AGTATTGACA AAGAGGTCGG AACTGGTAAC TGCGTACCTT CCAAGCCCGT GATCATCGCC GACTGCGGAC AGATCTCATA AGTCTTTGAG TTTTTTATCC T 
Length771
Protein Sequence
Protein Residue
Map Locationscaffold_3: 10490853.. 10491623
Download Sequence
A.thaliana
AGI-codeAT3G21481.1
Description
TAIR curator summaryPseudogene of AT4G34870; ROC5 (ROTAMASE CYP 5); peptidyl-prolyl cis-trans isomerase
Alias
Gene coexpression
MR
MR Locus Description
37.054 Ahg495065 ethylene response factor 110
59.4979 Ahg317859 Homeodomain-like superfamily protein
61.9193 Ahg486927 cation exchanger 4
71.1196 Ahg477911 NOD26-like intrinsic protein 7;1
72.7324 Ahg921896
86.7179 Ahg337343
97.391 Ahg949154
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression