Detail



ID : Ahg930601

Blast(Query) A.halleri   /   A.thaliana (NOT RECIPROCAL)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|930601|scaffold_303058.1
Sequence
GTTGTTACGT TATCAGCTCA AAATGGATGT TGGCCGTGCT GCTTCAAGAA GCGATTTGTC GACAGTGCGG GACGCACTTG AAGTTTCTGC AGAAATGTTC AAGAAAGATG CCAATAATGT TTCAGACTAT GTTCAGCGTC ATCTCATCTC CATATCCATC TGGGAGGAGT TGAGATTCTG GGAGGGTTAC TTCGAGTATC TCATGGAGCA GCCTGCAAAT GAATCAGTGA ACTATGCTAC TTTGGTCACA GCCAGGCTAA TCATAGTGGC ATCACATATG GCTGGCTTGG GACTTCCTGA TACAGAAGCT TGGAACATGA TCGAGACAAT AGCAGAGAAA CAAAAACTTG GATACAAATT ACTGGTAATT AGGCTTTCTG TTTATTAATT CCGTCGCAAG AAATTGTTA 
Length409
Protein Sequence
Protein Residue
Map Locationscaffold_3: 11474109.. 11475103
Download Sequence
A.thaliana
AGI-codeAT1G49040.1
Descriptionstomatal cytokinesis defective / SCD1 protein (SCD1)
TAIR curator summaryEncodes soluble protein containing N-terminal DENN domain and eight C-terminal WD-40 repeats. Involved in cytokinesis of guard mother cells and leaf epidermal cells. The overall growth and development of mutant plants is severely affected, they are smaller than wt, with defects in seedling development, leaf expansion and flower morphology which renders the mutant conditionally sterile.
Alias[SCD1][STOMATAL CYTOKINESIS-DEFECTIVE 1]
Gene coexpression
MR
MR Locus Description
21.7715 Ahg893776 protein serine/threonine kinases;protein tyrosine kinases;ATP binding;protein kinases
30.5123 Ahg483334 vascular plant one zinc finger protein 2
71.2881 Ahg495156 CLPC homologue 1
74.2967 Ahg473993
81.6333 Ahg942164 Protein of unknown function (DUF1677)
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression