Detail



ID : Ahg930784

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|930784|scaffold_303241.1
Sequence
CGATTTCTCA AATCGACTTT AATGGCTGAC GAAGATTACA ACGAAGTCGA TGACTTGGGA TATGAGGATG AGCCAGTTGA GCCTGAGATC GAAGAAGGAG TAGAGGAAGA TGCTGATATC AAGGAGAACG ATGATGTTAA TGGTGAGCCT ATGGAAACAG AAGATAAGGT TGAAACAGAA CCTGTGCAAC GTCCACGTAA AACGTCCAAG TTTATGACCA AGTATGAACG TGCACGTATC CTCGGCACTC GCGCTTTGCA GATTAGCATG AATGCTCCTG TCATGGTTGA GCTGGAGGGT GAGACTGATC CACTTGAGAT TGCGATGAAA GAGCTTAGGC AAAGGAAGAT TCCATTTACC ATTAGACGAT ATCTACCTGA TGGGAGTTTT GAAGAATGGG GAGTCGATGA ACTGATCGTG GAAGACTCGT GGAAACGTCA AGTTGGTGGT GATTGATAAT CTGGCAAGAG ACAAAAT 
Length477
Protein Sequence
Protein Residue
Map Locationscaffold_3: 12625340.. 12626533
Download Sequence
A.thaliana
AGI-codeAT2G04630.1
DescriptionRNA polymerase Rpb6
TAIR curator summaryOne of two highly similar proteins that can serve as a non-catalytic subunit of nuclear DNA-dependent RNA polymerases II and V; homologous to budding yeast RPB6 and the E. coli RNA polymerase omega subunit. Probably redundant with At5g51940.
Alias[NRPB6B][NRPE6B]
Gene coexpression
MR
MR Locus Description
4.24264 Ahg929351 Transducin/WD40 repeat-like superfamily protein
5.2915 Ahg356397
8.60233 Ahg895753 HSP20-like chaperones superfamily protein
12.49 Ahg471471 Actin-like ATPase superfamily protein
13.4164 Ahg347136 SWAP (Suppressor-of-White-APricot)/surp RNA-binding domain-containing protein
13.8564 Ahg494357 F-box family protein
14.2478 Ahg494272 casein kinase II beta chain 1
17.3205 Ahg902795 WD40/YVTN repeat-like-containing domain;Bromodomain
19.4936 Ahg495015 FAD/NAD(P)-binding oxidoreductase family protein
20.4939 Ahg486427 diphthamide synthesis DPH2 family protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression