Detail



ID : Ahg931000

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|931000|scaffold_303457.1
Sequence
AAGCCCACTT TTTAGCGACA TGATAGCATG AACTCTTCCC CCGATGTAAA CATTTCCTGC CTAACAGATT TGTAGACGTC CAGGAAGCTT AAGATCTTAA CAAGAAAGAT ATAAGGCGAT GGCGTCGCCA ATTGCATGAA AGAAAGGCCT TTTAGGGGAG TTGGCTCGTG TGTGGAGTGA ATTCCTCTGT CCTGTGTGCG GAAGGCATAT GAAGTAGTCC AGTAAGGATT CAAGTCAGGT TGTATTTGGA TTTTGCAACT CGGAAATTAT CATAGATTGA TGATCCTTTC CTTACCCTAC TGCCTATCAA CATTAAAAAT ATGCAAAATA GCCCTTATAT AAATATAACC AACCCGATCT ACGAGTGGAT ATTGCCTTTT TTTTCATCGG CGATCTTTCA TAGAGTTGCC GAAGCCAGAA AATCTGCTAA TGCAATCCGC AGAATTACAT CAGATCAAGG TGTGGATCTA TTTCGAACAA GTGATATCCA AGAAGAAGCC ATTCGTTACT TCTCCAACCT GTTTCAGTTT TCACCGGTGA ACCACACTCG AGCCTCTATC TCATCCCTTC GCTCTCTTAT CGACTTCATC AGATGCTCCA ACTAGATGCA AGCGAATCTT CTGCAACAGG TTAACTACGG AGGAGATTCC AA 
Length652
Protein Sequence
Protein Residue
Map Locationscaffold_3: 14409812.. 14410463
Download Sequence
A.thaliana
AGI-codeAT2G07767.1
Descriptiontransposable element gene
TAIR curator summarysimilarity to putative non-LTR retroelement reverse transcriptase
Alias
Gene coexpression
MR
MR Locus Description
39.8873 Ahg481664 transposable element gene
54.9181 Ahg473700 transposable element gene
71.9583 Ahg931002 Cytochrome C assembly protein
81.6088 Ahg351609 Protein of Unknown Function (DUF239)
83.2827 Ahg341194 Homeodomain-like superfamily protein
93.6483 Ahg929770 Protein kinase superfamily protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression