Detail



ID : Ahg931053

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|931053|scaffold_303510.1
Sequence
TTGTTCAAAG AAACTCATCC ATCAATGGCG AAACTCAAGG TTGCTGGTAC ATGGGGAGGT ATAATTGAAG TAGAACTCGA GAATTGGACT CTACACATGT TGAGAGACGA AGTCGCTAAG CGATCAGGAC TTGATCCTGA ATCAATCAAA CTAATTTTCG CCGGAAAAAT CCTCAGAGAC GACGGCGATG CTACTCTAAC ACTTGCGCAA TTAGGTATTA AAGAAAACTC CAAGATCCTC TCTAGTCGTG GTACTGCTCC CGAAGAAGGC AAGTCTATCA TGGCTGAAGA AGAAAGGTCT CGTCGTCTCT CTCGTGTCAA AGCTGCTGCT ACAGCTTTGT CCAAGAGACA TGCTGATGGT TCGTTGCCGA TCCAAGACTA TAACATAGAG CTTGAAGATC AAGGAGGTCA TAAAGTACAG TTTGGAACTG AGACTGATCA GAGTGCTGCA ATGATGGGTC TTATGTTACA TACAAAGGCA AAAAGTCTAA TCGAAATGGA AATGTATTCT GATGCTGTTG AAGTGCTTGC TATGGCAGAG GAATCATTCT TGCTCTGTGA TCCCAAGATT CTTGAGCTTG TTGACAACCG CCCTATGATG GAAATAGACA TTGTCTGGTG CTATTTCTTG CTCCGAGACG TCAAATGCCT TTCAGATGCT GGCGTTCGCC TTGAGAGAGC AAGGAAGGGA CTCGAGCGTG CTCATGGGAA GGATCTCTCT CGTGTGAGAC TCCTTCAAGC AGGGCAAAGT CCAGAGATGG CACTATATTT GAGACTAGAG TTGCTAGAAG GTGTTGTGGC ATATCACACT GGTCAGTATG ATAAAGCCTT GAATGCACTG AAGTCTGCCC ATGCGAAATT CTTGCAGCTA CAAATACCCG ATGAAACACT GTCGCTTGTT ATGGGTATGG GCTTCCAAGA GAAGGATGCT AAAAGAGCTT TGCGACTGAA CAATCAGGAT ATTGCAAGTT CTGTTGATTT TCTTATCGAA GAGAGGGCAA AAAGAGCCCA AAAGCGGGAA CAGGATCTCC AGAGACAACA AGAAATACTT GAGCAGAAAA AGTATGGAGT GACACCCATG AAGAAAGCTG TTGATATGCA GATGCTTGAG AGGCTCGTCT CTATTGGATA TGCGAGGGAT CTTGCTGCTG AATCCCTCCG GAGAAATGAG AACGATATTC AGAAGGCCCT TGATATACTC ACAGACCCAA AAGTTAATTC GACGATACAG GCTTACATTG AATCGAGGAA AAGAAAACGA CAAGAACAAC TAGTAGGCAT ATCAGTTGAT GAACTTGTGT CTATGGGATT TGAACGAGGA AGAGCAACCT CTGCTTTGGA AGCTGGTGGC AACCGAGAAG ATATAATCCA AAGGCTACTA TCTGCATCAG AAGCAAACCA AGGAACTACC TCTGCTGTAA ATGCAACAAG TAGCACAAAC AATGGGGGTG CGGAGAGCAG TGGTTTTGGG GGTCGAGAAA GCACATCCAA TGAAATTGAT GGTGGGGCAG AGCAGGACTC TGAGATGAAA GATGAAACAA CGGATGACAT TGCAAACCGA GAAGGTACAT CCAGTGATGT TGGGGAAGAA GAACGGGACT CTGAGATAGA AGATGAAATA GCTGATGAGA TTGCAAAGGT TGATGCTTTG TCGGCTTATG ACATCAATCT TGACAAGGAA ATTGAAGCTA TAAATGAGTA CCTGGCCATG CTGGATGCAT CCCAGGAGTC TGGTTGAAGA GCGGATTGTA CTGGAGA 
Length1757
Protein Sequence
Protein Residue
Map Locationscaffold_3: 16902826.. 16905688
Download Sequence
A.thaliana
AGI-codeAT2G12550.1
Descriptionubiquitin-associated (UBA)/TS-N domain-containing protein
TAIR curator summary
Alias[NUB1][homolog of human NUB1]
Gene coexpression
MR
MR Locus Description
7.48331 Ahg492695 P-loop containing nucleoside triphosphate hydrolases superfamily protein
12 Ahg491808 Metallopeptidase M24 family protein
13.4164 Ahg474546 E3 Ubiquitin ligase family protein
24.7992 Ahg490342 sucrose synthase 3
26.8328 Ahg479422 histone acetyltransferase of the TAFII250 family 2
34.6121 Ahg496280 glucuronidase 1
35.242 Ahg473550 P-loop containing nucleoside triphosphate hydrolases superfamily protein
39.95 Ahg481564 DNAJ heat shock N-terminal domain-containing protein
40.1871 Ahg897419
40.3609 Ahg482001 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression