Detail



ID : Ahg931132

Blast(Query) A.halleri   /   A.thaliana (NOT RECIPROCAL)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|931132|scaffold_303589.1
Sequence
TTACCTCAAC AATGTCATTC AATGCCTCTT CTCGTTAATT TCTACATTAC TCACAAACAC TCCTCTCTGC ACTTGCAAAA GGGAGAGTAT GAGAGTATGA TCAAATGTGT ACAAGTTCTC AAGAATGGAG GAAATTTCAG GGATGGAGCA CATCGACATG CTCCATTACA TGTGTTGGCG ATGAAGTCTT GGTTAGGACT TGGGAGGCAT AGTGAGGCAG AGGAGGAGCT AAGAGGTATG GTAGGAAACA AAGACATTCC AAAAGTTGTG TGGATTCATA CTTTGAAGTG GTGAGAACTG CTCGTTTAAA TCCT 
Length314
Protein Sequence
Protein Residue
Map Locationscaffold_3: 17627945.. 17628419
Download Sequence
A.thaliana
AGI-codeAT5G48390.1
DescriptionTetratricopeptide repeat (TPR)-like superfamily protein
TAIR curator summaryDefective in meiotic chromosome segregation. It is involved in crossover formation and involved in both male and female meiosis.
Alias[AtSPO22][ATZIP4][A. thaliana homologue of yeast SPO22]
Gene coexpression
MR
MR Locus Description
3.4641 Ahg333418 low-molecular-weight cysteine-rich 51
4.24264 Ahg923835
8.12404 Ahg943831
12.2474 Ahg930482
16.5831 Ahg924518
17.3494 Ahg936201
17.8885 Ahg952137 Thioredoxin superfamily protein
23.4947 Ahg932605 Plant self-incompatibility protein S1 family
31.4643 Ahg952262 copper ion binding;electron carriers
35.1426 Ahg925902 Carbohydrate-binding X8 domain superfamily protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression