Detail


ID : Ahg931164

Blast(Query):  A.halleri   /   A.thaliana (NOT RECIPROCAL)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|931164|scaffold_303621.1
Sequence
AAGCTTCAAA CTTGCAAGTG ATGGCTTCAG GAAAGACACC TGGACTGACT CAGGAAGCTA ATGGGGTTGC AATTAATAGA CAAAATGACA ATGATGTATT TGACGACATG AAACAGGATA ACTTAGAACA CTACAAAAAT TTGGCAGATG CTCAAGCTCC GAAGTGTAAG CAACAGTTTC TGGTGATCGC TTGTGCAGAC TCTAGGGTTT GTCCTTCTAC TGTCCTGGGA TTCCAACCGG GTGATGCATT CACTGTTCGC AACATTGCAA ATTTAGTACC TTCATATGAG TCGGGACCTA CTGAAACCAA AGCTGCTCTA GAGTTCTCTG TGAATACTCT TATTTCATAT CAAGATACTG AATGTGGTGC TGTTAATGCT TCTAATGGCC CCATTAATAC ACATGTCTAT GACTGTTCTA TAAATTACAA CAACGTAGGT GGAGGATGGG CAAACTTGGA TTATAATCAT CACTACTCAT TTGCGCCTTG CAACTTCTTG CATAGACCAA AGCCTATGTT TGGTCTGGAA GGTCGTCAAG AAGAAGAAGA ATGTGGTGTC AATGCTTATC TGGAACATCG ACGTAGGCTT CCTCTCTTCC CTATGCACGG TGAAGACCAC CTCAACGGTG ATAGCGGTGC TATCTGGAAG TATGGCCAAT CGAACGATCG TGATTGTTTT AGTAGAGACT CTTGTGCTTC TCTTGAGCTA CGTATGAACT AGACACCGTT ATACACATAC AA
Length742
Protein Sequence
Protein Residue
Map Locationscaffold_3: 17869123.. 17871067
Download Sequence
A.thaliana
AGI-codeAT2G17950.1
DescriptionHomeodomain-like superfamily protein
TAIR curator summaryHomeobox gene controlling the stem cell pool. Expressed in the stem cell organizing center of meristems. Required to keep the stem cells in an undifferentiated state. Regulation of WUS transcription is a central checkpoint in stem cell control. The size of the WUS expression domain controls the size of the stem cell population through WUS indirectly activating the expression of CLAVATA3 (CLV3) in the stem cells and CLV3 repressing WUS transcription through the CLV1 receptor kinase signaling pathway. Repression of WUS transcription through AGAMOUS (AG) activity controls stem cell activity in the determinate floral meristem. Binds to TAAT element core motif. WUS is also involved in cell differentiation during anther development.
Alias[PGA6][WUS][WUS1][WUSCHEL][WUSCHEL 1]
Gene coexpression
MR
MR Locus Description
2 Ahg479229 F-box and associated interaction domains-containing protein
3.87298 Ahg934984
4.69042 Ahg946834
5.47723 Ahg490246 Kinase interacting (KIP1-like) family protein
14.1421 Ahg912035
15.2315 Ahg348087
15.6205 Ahg903586 other RNA
16.6132 Ahg891686
19.4422 Ahg922027 cyclase associated protein 1
19.799 Ahg931320
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression