Detail



ID : Ahg931278

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|931278|scaffold_303735.1
Sequence
CTTGTGTTCT AGTTAAAGGT ATGAATCCAA TGCAAGGGCC ACGAGCTACT GGTGCTTCGT CTACTGACGT GAATCAGGCA GATGGTGAAT CGATTTATTG CACAGAGACC GCTATGAATG ACATGTTGAA TCCAGCAGAC ACTGGATTTC CAAACAATAG TACACCTTCA GGACGGCCAA CTTATGCAAG TTCGAGTTCT CATGCTGCTC AAGATCATAA CTGGTGGAGG TTTGGGGAAT CCAGCTCCAT ATCTGGTCCT TCTGATCAGG TCAATTCCAT TGGAATGAAG ACAAGTCACC AGCTGCCTCA AGATGGTGCT CATCACTTTG TTGGCTATGG ATCTGAGGGA AGGGAATTAG GTCTGAATGG TATGATGGTA GATGGAGGGG TTCATGCTGG CAGTCACATC AGGAATGGGC CTTCTTTCTT GCGCGGTTCA AGCTCTAATC CTATGCCACA GCATGTAGAT ATGAGCATGG ACATGGACAG CGATAATTGT AGTGCACAGA CTTCCGGGGT AGTTATCCGT CACAATAGCT ATGGGAGTTC ATTAGGAAGC TCAATTCAGG CCGCAGGGGA GAGCAGCAGT GGTCCTGCTT CTCCGTTTGG TGGTTGGGGT TCGTCCTGCA AAAGAAAGAC TCTCGAAGGA TCCCCTGGCC ATTATTTTTC TGGTGAAACT CCTAACCGCA TTGTTCAGAC TGAAAATAGT GCTTCGCATG CAAGTCTTTC TCAATATGGT GCTTCAAGTA GCTTAAGTTT GGCTACACCC TCACAAAGTT CTCCAAATGT TACTAATCAT TTTGGCCGGA CAGAACAAAT GTTTGGATCT AGTGGTGGAA GAGCAGTTGC AGCCAGTGCT TTTCATTCTG CAAGAAACAC TGACACCTTA TCTAGAGCTG GCAGACGATT AAATCCCAGG CAGCCTCAGG AGTCTGTAGC ATTCAGCGTA TCACAGGCTG GAACTTCTGT GCATCCCACT GGTTCTTTGC AACAGAATTT ACCATTGAAC TCTCCCTTTG TAGATCCTCT AGATGTGAGA TCAACTAGTG GCTCAAGCAC TGGTGAGAAT CAGACAAATA TAGTCCACCT CCCTGCTTTG ACCAGGAATA TACACCAATT TGCTTGGGAT GCTTCTTTCA GTTCCAGAGC CAGTAATTCG TCGGGTATTG GGATGCCTGC AGAGCGATTA GGACCACAGT GGGAAACACC GAGAAGCAAC CCAGAGCAGC CCATGTTTGC ACCTGCAACT GACATGAGAC AGCCGGTGCA TGATCTTTGG AATTTCTCAC ATGGAAACCC TGGTTCATCT ATAGATTCTC CCTTTGTTCC TCGAGCAGGG CCGAGTTCAG CTATTCATGC GCCACAGCCT AATCCCACAT GGATTCCTCC CCAGAGTGCC CCAATACATA ATCCATCGAG AACATCAGAA CTTTCTCCTT GGTCTTTATT TCCTAGTATT GAATCTCAAT CTGCTAGTCA CGGTGCCTCT CTTCCATTAT TACCCGCAGG CCCTTCTGTT TCCTCAAATG AGGTGGCAAT GCCATCTGGT TCTAATAGCC GGAGCCATCG CTCACGGCAA AGAAGATCAG GGTTGTTATT GGAGAGACAA AATGAACTTC TCCACTTGCG TCACATAGGG AGGAGCTTAG CTGCTGACGG TAATGGAAGG AATCAAATCA TCTCCGAGAT ACGTCAGGTG TTGCATGCCA TGAGAAGAGG AGAAAATTTA CGGGTTGAGG ATTACATGGT GTTCGATCCA CTTATCTACC AGGGTATGAC TGACATGCAT GATAGGCATC GGGAAATGCG GCTTGATGTT GACAACATGT CGTATGAGGA GCTATTGGCA CTTGGGGAAC GCATAGGTGA TGTGAGCACT GGCCTAAGTG AAGAGGTCAT TTTGAAAGCA TTGAAACAGC ACAAACATAC ATTTTCTTCT GCTTCTTCTG CTGAGTTGCA TCAGAACATA GAGCCATGCT GCATTTGTCA GGAAGAGTAT GTAGAAGGTG ATAATCTTGG AACCTTGAAA TGTGGACATG AATTCCACAA GGACTGTATC AAGCAATGGG TCATGATCAA GAATCTCTGC CCCATTTGTA AGACCGAGGC ATTAAAGACG GCATAGTACG TATGCTTGCC TCCATC 
Length2146
Protein Sequence
Protein Residue
Map Locationscaffold_3: 18960284.. 18964088
Download Sequence
A.thaliana
AGI-codeAT2G15530.4
DescriptionRING/U-box superfamily protein
TAIR curator summary
Alias[MBR1][MED25 BINDING RING-H2 PROTEIN 1]
Gene coexpression
MR
MR Locus Description
1 Ahg932741
1.41421 Ahg311407 Beige/BEACH domain ;WD domain, G-beta repeat protein
1.73205 Ahg939036 squamosa promoter-binding protein-like 12
4.24264 Ahg935024 Tetratricopeptide repeat (TPR)-like superfamily protein
4.24264 Ahg944826
5.65685 Ahg495420 ARM repeat superfamily protein
5.91608 Ahg491382 Cyclophilin-like peptidyl-prolyl cis-trans isomerase family protein
6.245 Ahg478089 Transcription factor jumonji (jmjC) domain-containing protein
8.48528 Ahg950278 WPP domain interacting protein 2
11.3137 Ahg486764 galacturonosyltransferase-like 7
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression