Detail



ID : Ahg931379

Blast(Query) A.halleri   /   A.thaliana (NOT RECIPROCAL)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|931379|scaffold_303836.1
Sequence
AACGACGCCT TAACGAAACG ATGCCGCAGA GACGGAGACT AAGAGGAGGA GGAAACATTC GGCGATTCTT TTACATGGCA ACGCTTCTGG TTAATTTGCA GCTATTAGCC ACCAGCTACC TTCAAGCCCA CAGTGTATAT CATCTGCTAA AGGGTGCGTG GCACAAATGG CTCAGTCCCC GTACTTGTTC GCACAAATGG CTGAATCTGC ACTCTGCCCT GTTAGAGCAA CCACAATGGT GGTCCTATGA AGGTTTCTTA AGATTATAAT ATTAAAAAGA AATACAAAA 
Length289
Protein Sequence
Protein Residue
Map Locationscaffold_3: 19580513.. 19581192
Download Sequence
A.thaliana
AGI-codeAT2G20000.1
DescriptionCDC27 family protein
TAIR curator summaryRequired for cell division and cell differentiation in meristems. Encodes a homolog of the CDC27 subunit of the anaphase-promoting complex (APC). Unlike other CDC27 homologs in Arabidopsis, its transcription is cell cycle regulated. Strong hbt mutants give rise to seedlings that lack an anatomically recognizable quiescent center and differentiated columella root cap cells, the cell types derived from the wild-type hypophysis. Furthermore, they have no mitotically active root meristem and lack a differentiated lateral root cap.
Alias[CDC27b][HBT][HOBBIT]
Gene coexpression
MR
MR Locus Description
12.6886 Ahg313252
17.5784 Ahg311412 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein
20.3961 Ahg943722
20.7123 Virus2439
22.8473 Virus1202
31.8119 Ahg474323 Mannose-binding lectin superfamily protein
32.8024 Ahg923568
37.7492 Ahg943037
40.7922 Ahg932615
53.619 Virus1148
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression