Detail



ID : Ahg931766

Blast(Query) A.halleri   /   A.thaliana (NOT RECIPROCAL)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|931766|scaffold_304223.1
Sequence
TTTTTACTAA TGTAAGAATA ATGGAATCAA GTAGAAAGGA AAACAATGTT GTTCCGGCTG TTCCGGCTGG ATTTAGGTCT CCATTATGTT CCGGCTGGCC ATGTTCCTCA TTAAGTATGG CTTGTGTATC AACTCAAACC ATTTTTCTGT ATCTTGTAAT CGTTTTTCTA TCTCTACACT TCGTGTTTGC AACTCTTAAA CAACGACTAA GTCCCGCGAT TACGCGGCGG CTTATCCGTC TCCTCCACCG CCGTAACAAA TTTCCGGCAG CCGCCTCTGT TTTCCTCCGA AAAGACGCCC GTGAGTTTCT TGATTCATCA ACCCAAATAG AAAACAAAGA AGACGATTTC GGTTTCAAAC CGTACATGAT CAGGAAAGCA GAGACAATAA ACAGAGCACT AGACAAAGCC ATTCCACTCA TTGAGCCTCT CAACATCTAC AAGGCAATGC GTTACACGAT TTTCGCAGGC GGAAAACGCG TTAGGCCAAT ACTCTGCCTC GCCGCTTGCG AGCTAGTGGG CGGGGGAGAG CGTTCAGCGA TTCCAGCGGC TTTTTCGGTT GAAATGATTC ATACAATGTC ACTAATCAAA GACGATCTTC CTTGTATGGA CAACGACGAT CTCCGACGAG GTAAACCAAC AACACACAAA GTATTCGGAG AAAGTGTAGC TATTCTCTCC GGCGGCGCAC TTTTAGCTCT AGCTTTCGAG CATTTGACGG AAGCTGACGT GTCTTCCAAG AAAATGGTTC GAGTCGTTAA AGAATTGGCT AAGTCTATTG GAACAAAAGG ACTTGTGGCG GGACAAGCGA TGGATTTAAG CAGTGAAGGG CTGGATCCAA ACGACTTCAG ATTAGAGGAT CTTGAATATA TTCACGTTCA TAAAACAGGT GCGTTGCTTG AAGCATCAGC GGTTATCGGA GCGGTTATTG GCGGTGGATC AGAGGAAGAG ATAGAGAAGG TGAGAAGCTT TGCGAGGTGT ATTGGATTGT TGTTTCAGGT GGTTGATGAT ATCTTGGATG AGACCAAGTC CTCGGAGGAA TTGGGAAAAA CCGCCGGAAA AGATAAGGTC GCCGGAAAGC TAACGTATCC GAGAGTGATT GGTCTTGAGA AATCTAAGGA GTTTGTGAAA AAGTTGAATA GAGAAGCTAA AGAACATATT CAAGGGTTTG ATGAGGACAA AGTGAAACCT TTGATTGCTC TTACTAACTT CATTGCCAAC AGAAACAACT GAAGATGTTA TATAATGTAA TC 
Length1252
Protein Sequence
Protein Residue
Map Locationscaffold_3: 21604356.. 21609656
Download Sequence
A.thaliana
AGI-codeAT2G18640.1
Descriptiongeranylgeranyl pyrophosphate synthase 4
TAIR curator summaryEncodes an endoplasmic reticulum-targeted geranylgeranyl pyrophosphate synthase
Alias[GGPS4][geranylgeranyl pyrophosphate synthase 4]
Gene coexpression
MR
MR Locus Description
26.2488 Ahg899940
51.7107 Ahg930422
62.2736 Ahg351609 Protein of Unknown Function (DUF239)
63.8044 Ahg481945 LOB domain-containing protein 13
86.6025 Ahg921700 ENTH/VHS/GAT family protein
86.8332 Ahg945592
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression