Detail



ID : Ahg932390

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|932390|scaffold_400378.1
Sequence
AACAAGTCAG AAGAATCAAA ATGGAGTTCT CTATTAATCC TTCAACTCTA AAGATGATTC GGACAAGTTT TTGTATATTA GTAGTTTTGG CAATTAGTAG TTTTTCGATG ATGGAAGCTC GGGATCTAGG CTGCAAAGGA AAGACAAATA TTGAATATAT GGCGTTGAAT TGTCGAAAAC ATACCGCAGT TTTGACAGAA TTTGGAGCAG TGGGTGATGG AAAGACCTCG AACACGAAAG CGTTTAAAGA AGCCATAACT AAGCTTGCCC CCAAGGCGGC GGACGGTGGA GTGCAACTCA TTGTTCCACC AGGCAAATGG CTAACCGGAA GTTTCAACCT CAGCAGCCAT TTTACTTTGT TCATCCAAAA AGGTGCAACT ATTCTTGCTT CTCAGGATGA ATCTGAATAT CCAGTGGTTG CACCTTTGCC ATCATACGGA CAAGGAAGAG ATGCAGCAGG ACCAACATTT GCTAGTCTAA TCTCTGGCAC AAACCTAACT GATGTTGTTA TCACCGGTAA CAACGGAACG ATCAACGGAC AAGGAAAATA CTGGTGGGTG AAGTATCGAA GTGGTGGATT TAAGAATATC ACGAGACCTT ACACAATCGA AATCATGTTC TCTCAAAATG TTCAGATCTC GAACATCACG ATCATCGATT CGCCTGCATG GAACATTCAT CCCGTATATT GCAACAACGT CATCGTCAAA GGCGTTACCA TTCTTGCTCC TATCGATTCT CCTAATACCG ATGGAATCAA CCCTGATTCG TGCACCAACA CATTGATAGA AGACTGTTAC GTAGTCTCTG GAGACGATTG CATAGCCGTG AAGAGCGGTT GGGATCAGTT TGGTATCAAA GTCGGCATGC CAACTAAACA ACTGTCCATC CGACGGCTCA CATGCATCTC TCCCGACAGC GCAGGAATAG CACTTGGAAG CGAAATGTCC GGTGGAATCA AAGACGTTAG AATCGAAGAC ATTACGTTAC TCCAGACACA ATCCGCTATC CGAATCAAAA CCGCAGTTGG TCGTGGTGGT TACGTTAAGG ATATATTCGC CCGGAGGTTC ACAATGAAAA CCATGAAATA TGTTTTTTGG ATGAGCGGTG CTTATAACCA ACACCCCGCT TCCGGTTTTG ATCCCAAGGC TATGCCCGAG ATTACGAATA TTAACTACCG TGACATGACC GCGGATAATG TCACACAACC CGCAAGGCTC GATGGGTTCA AGAACGATCC ATTCACAAAG ATATGTATGT CGAATATAAA GATTGATTTG GCTGCTGAGC CAAAGAAGCT GTTGTGGAAT TGTACAAACA TCTCCGGAGT TTCGAGCAAG GTGACACCCA AACCATGTAG TTTGTTGCCG GAGAAAGGAG CACCGGTGGA CTGTGCTTTT CCGGTTGATA AGATTCCTAT TGAATCTGTT GTCCTGAACA AATGCTCTGC TTAGAGATTG TGAACGGAGA TAAT 
Length1474
Protein Sequence
Protein Residue
Map Locationscaffold_4: 2029715.. 2031685
Download Sequence
A.thaliana
AGI-codeAT2G23900.1
DescriptionPectin lyase-like superfamily protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
6.78233 Ahg486726 VANGUARD 1 homolog 2
12 Ahg496320
16.4924 Ahg331706 oligopeptide transporter 9
19.5192 Ahg490181 BCS1 AAA-type ATPase
28.1425 Ahg479716 Domain of unknown function (DUF26)
28.9137 Ahg351609 Protein of Unknown Function (DUF239)
32.1248 Ahg921560 FBD, F-box and Leucine Rich Repeat domains containing protein
32.8634 Ahg888244
34.7131 Ahg494865 Pectin lyase-like superfamily protein
34.7851 Ahg922139 FAD-binding Berberine family protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression