Detail



ID : Ahg932909

Blast(Query) A.halleri   /   A.thaliana (NOT RECIPROCAL)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|932909|scaffold_400897.1
Sequence
ACAGAAATTA TTCAAGTTCT AATGGCTTCT AGTTCGAATG TGGATCCTCG TGGAGCATCA GAGTCAACAG TTTTGAAGAG AAACTCGAAT GATGTTGCTT GGGACTATGG AATTTTGTAT GATCTGAAGA ATCTTGACAA GGTCAAATGT AAATTGTGTG GGAAAGAATT TTCAGGAGGT GCATGCAGGA CAAAGAACTC AACAACAGGG ATCTTAACTT CGGTCAACGC CGCAGATGAT GGGTCCAGTA GTTTCGGAAA AACCAACCTG ACCGGAGTTA GAATTTATCC GACATTGAGT CGGCGACGAT TCTCATCGAT CCGAGTTGTG TCCCCAATTC GCGGAGATGC CCAATCTTCC TTTAGTCGCA GTTCTTTCGT TTGCTCTCAG AATCTTGGTT TGAGCGGTGG AATCAGTGGT TTCAGTGCAC CTGAAGCTCT GCCAAATGTT TGTGAAAATG CCACTCCTTC TTCCATCAAA TCTTTCAACC AGTTGATTGA GACTTTGATT GATCGGGTTG ATCTATCTGA AGCTGAGGCT GAATCATCTC TCGAGTTTTT GCTGAACGAG GCAAACGAGG CACTAATTAG TGCCTTTCTG GTTCTCCTGA GAGCTAAAGG AGAGACATAC GAAGAAATTG TGGGGTTGGC TAGGGAAATG ATGAAGCATG CCAGGAAAGT GGAAGGATTA GTCGATGCTG TGGACATAGT TGGAACAGGT GGTGATGGAG CAAACACAGT CAATATATCA ACTGGATCTT CAATACTTGC TGCAGCTTGT GGTGCAAAAG TAGCAAAGGC TGTGATCAAC GCTAAGGCTT TGCAGAGTTA TCATTTAGTT GAAGATACTG ATGATACTTA CAGCAGATCA TGTGTGCACA GAGACATTAA GTCTAGCAAC ATTCTGATTG ATGACAAATT CAATTCTAAA ATTTTTGAGT AATATGTGTC AGTGCACTGA GT 
Length962
Protein Sequence
Protein Residue
Map Locationscaffold_4: 6219985.. 6222494
Download Sequence
A.thaliana
AGI-codeAT5G17990.1
Descriptiontryptophan biosynthesis 1
TAIR curator summaryEncodes the tryptophan biosynthetic enzyme phosphoribosylanthranilate transferase (PAT1, called trpD in bacteria). Converts anthranilate and phosphoribosylpyrophosphate into phosphoribosylanthranilate and inorganic pyrophosphate.
Alias[pat1][TRP1][PHOSPHORIBOSYLANTHRANILATE TRANSFERASE 1][tryptophan biosynthesis 1]
Gene coexpression
MR
MR Locus Description
8.24621 Ahg946413
19.2873 Ahg952264 Acyl-CoA N-acyltransferases (NAT) superfamily protein
22.7156 Ahg330989
24.7992 Ahg925354
24.8998 Ahg952323
25.807 Ahg949801
27.4955 Ahg907586
31.3688 Ahg942175
38.3275 Ahg915124
38.3927 Ahg914618 winged-helix DNA-binding transcription factor family protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression