Detail



ID : Ahg933241

Blast(Query) A.halleri   /   A.thaliana (NOT RECIPROCAL)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|933241|scaffold_401229.1
Sequence
TAGTATCAGC CGACTTGCAT ATGCAGTTAC CTGGAGACAT GGGATCAGAG ATTTGTGGTC CTGTCTCTGG CTTGTTCTAT TTCCCTAATA TGCGGAGAAG TGAAGTGCCG GTGATATGTA ACCCTAGCAC AGGACAGTAC GCAAGATTAC CTCAATTGAA AAGGAAAAGG GATTCAAGAA GCTTATTAGG TTATGATCCT ATTGGCAAAA GATATAAAGT ATCAAACATA AGAAATTCAA TTTATGGAGC ATCTAATGAA GAGGGACATA TTATGACATT AGGAACTGGG AAAATGTCAT GGAGAAAACT GCATTGTCCG GAAAACCATT ATCCTATAGG GGAAGGGGTA TGCATCGATG GGGTTTTGTA TTACATTGCT GGACAAGCAA AAGGTGTGAA GTTAGCTTGC TTTGATGTTA GGAATGAAAA TTTTAGGTTT CTTAAGACAG ATTCTATTAT TAGGAAGTTA TTAGTTTCTT CTTCGTCTAC TTCTTCGTCT ACTAAATTGA TAAAATACAA GGGTAAATTA TGCGTAATTA GTTGGCGTTG GGATAGTTAC GTTTATGGAA GAGCTAGGTT GTGTTTGCAG ATTCTAGAGG ATGCCCAGGA TCAAAAATGG TTGGAACATC GATACACTTT TCCGGTGAAT ATTGTCGTTA AGGGAGATGT TTCCGTCGTT GGAGTGACTG CTACTAATGA AATTATTTTG TCCATGGACT ATACATCTAA AGCTTTCTTT GTTTTCTACT TCAATCCCGA AAGGAGAACT CTTGAGAGAG TTAGAGTCCA AGGTTTTGAA GCGTTTGAGA AGCCTAATAG AGTTTACACC TTTGTAGACT ATGCTGAGGA TTTCAAGTTT ATAACAGAGT CTAGCTAGTT TGCCTCTAAA TGGACATTT 
Length899
Protein Sequence
Protein Residue
Map Locationscaffold_4: 11685343.. 11686241
Download Sequence
A.thaliana
AGI-codeAT5G52620.1
DescriptionF-box associated ubiquitination effector family protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
11 Ahg916655 LOB domain-containing protein 5
11.6619 Ahg930584
11.6619 Ahg950610
12.2474 Ahg952060 Cytochrome b561/ferric reductase transmembrane with DOMON related domain
17.4356 Ahg929976
22.7156 Ahg907710
30.5778 Virus1340
33.2415 Virus1290
33.7639 Ahg313838 Cysteine-rich protein
35.2136 Ahg924973
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression