Detail



ID : Ahg933396

Blast(Query) A.halleri   /   A.thaliana (NOT RECIPROCAL)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|933396|scaffold_401384.1
Sequence
TAATTCTAAA AACCATCAAT AATGATTACC TCCAAATCGA TAACTTTATC AATAATCTTC CTATTATACC TAGTTTCTTG CGTCTCAAGC CAGCGAGAAA CCAAGTTTCT AAACCATGGC TTTCTCGGAG CTAATTTCCT CAAGTTTGGC TCCTCAAAGA TCCACTCGAG TGGCCTCTTG GAGCTGACAA ACACTTCGAT GAGGCAAATT GGTCAAGCTT TTCATGGATT TCCCATATCC TTCTTAAACC CAAACTCCTC CAATTCAGTA TCTTTCTCGA CGAGTTTCGT CTTCGCCATC ACTCCAGGAC CAACGACACC AGGCCACGGC TTGAGCTTCG TTATCTCTCC GTCGATGGAC TTTACTGGAG CCTTTCCCAG CAATTATCTT GGCCTTTTCA ACACATCCAC CAATGGAAAC CCCTCAAACC GCATTCTCGC AGTTGAGTTC GACACGGTGC AATCAGTTGA AATGAAAGAT ATTGATGATA ATCACGTAGC CATCGACCAA AATGGGGTGG TCTCCATTGA ATCTGCCCCG GCTGCATTTT TCGATGACCG CGAGGCGAAG AACATAAGTC TGAAGCTGGC AAGTGGGGAG CCAATAAGAG TTTGGGTCGA ATACAACGCG ACTGAGATGA TACTCAATGT CACATTAGCT CCTCTAGATC GTTTGAAACC AAGCTTGCCT CTCCTCTCTC GAAAACTAAA TCTCTCGGGG ATTATCTCTC AAGAGAATTA TATTGGATTC GCTGCTGCCA CGGGAACCGT TACGAGCTCA CATTTTGTGC TAGGCTGGAG CTTCAGCATC GAAGGGAAAG CATCAGACTT TGATATTACA AAGCTTCCTT CTCTTCCAGA CCCGCCACCG CCATTTTCTC CATCCCCAAA TCCTCCGGTT TCAGCCAAAA AGAATTCGAA CAACACGAAG TTGATCATAG TCTTCGTTGC ATCAGGAACA TTTGGACTCA TGTTCTTGGG CTTCTTAGGT GTTTGTGTTT TCCGTAGAAA TAATACATTC TTCACAGGAG GTGCAAGAAA ATTCTCCTAC CAGACGATTT CAAGTGCAAC AGGTGGCTTC AACAGATTTT TAGGAGAAGA AAACTCCGGA CGTTTCTTCC GAGGTCAGCT AGCACCAACG GAGATAATCG CGGTAAAGAG AATTACTTGC AGCACAAGGC AGCAAAGGCT TTCCATGATA GCTCAAATCG ATGCAATCTC CAGGGTTAGA CATAGAAACC TTGTTAATCT AATTGGATAC AGCAGCAGAG GAAACGAGAT CTATCTTGTT TACAAGTATG TTCCTAACGG CAGTCTTGAT CGCTTCCTGT TGAGCAATGA GCGACCAGTT TTAAACTGGT CAGATCGGTT CAATATCATA AAGGGGATTG CCAAAGCATT GCAGTACCTT CACAGTGAGT GTCAGAGTAC TCTCATTCAT GGAAACGTCA AAAGCAGTAA TGTGCTCCTC GACGAAGAGC TGCACGCTCA GCTTGGAGAT TATGGGCAAG GAAACAGGCA AAGCAACACA GGTCATGTAG CTCCAGAGCT TGTTGAGGCA ACCGCAGTAC CAACATGTGA CACGGATGTG TTTGCATTTG GAGTGCTTAT AATTGAGATT GTATGTGGAC GTACTGCAAT TGAGCCGACA AAGCCACCAG AAGAGATCAG TTTGGTAAAT TGGGTGTTTC AAGGGTTTAG GAAAAACAAG TTGCTCGAGT GTTGCGATGC ACGAATCAAT CGAGAGGAAA TGGTGGCTCG GGAAGTACTA CTCGTTCTTA AATTGGGACT TCTATGTACA AACCGATCTC CGCAAGTCAG GCCAGTTATG AGAAAAGTGG TACAGTATCT TGATGGTACT GAACCACTCC CTCATGACGA CTAAATCTTC CATGGAGTCT AACA 
Length1904
Protein Sequence
Protein Residue
Map Locationscaffold_4: 12775053.. 12776956
Download Sequence
A.thaliana
AGI-codeAT2G29250.1
DescriptionConcanavalin A-like lectin protein kinase family protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
12.3288 Ahg897669 Protein of Unknown Function (DUF239)
20.7846 Ahg951175
27.8388 Ahg340259 Plant protein of unknown function (DUF946)
31.305 Ahg924931
46.2493 Ahg950670 pumilio 16
53.8331 Ahg951548 F-box family protein with a domain of unknown function (DUF295)
55.4797 Ahg484583 GDSL-like Lipase/Acylhydrolase superfamily protein
58.6174 Ahg327864 Dehydrin family protein
59.4979 Ahg488975 Leucine-rich repeat protein kinase family protein
59.8999 Ahg473052
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression