Detail



ID : Ahg340259

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|340259|fgenesh1_pg.C_scaffold_3000022
Sequence
ATGCAATTCT TGATTGAAAC CTACCTCAAA TCTCTATTGT TTTTTGTTCC TCTATTTGTT AAGCAGTTGT CATGGGCTGA AACTGGAACT AACCTCTTGA CCAACAGTTC CAATGTAAAT TCTTTAGGAT ATACATTCAA ATATCCATAT CTTTTGTCTA ATGGTTTACC GGTGGAAACA ACGTTTAAAT CTCCTAGTCT TTTGCCTAGT ATGCCTTCCG ATGGTGGAAA TTTTGGCAAA AGAAGCATTG ATTTGGGAGG TCTTGAGGTT ACTCAACTCT CTATCTCAAA CTCAACATCA CACAGAGTGT GGAGAACTTA TGAAGGAGGG CCGAATAACA TGGGAGTCAG CATCTTCGAA CCTACTGCTC TTCCTCGTAA CTTTTTAAAA CTTGGCTTCT ATGCACAACC CAACAACCGA CAGCTTTTCG GTTGGATTCT TGTCGCAAAA GACGTAGCCG GAAGTAATTT AAGACCACCA GTCGACTACA CTGAAGTTGG AAACACTACA TCACTGATTA GTATTAAACA AGATGGGCCA GCGTATTTTT GGCAGCCCCT ATGTCCTAAT GGGTATCAAG CGGTTGGTCT ATATGTCACT ACTTCTCCTG TGAAGCCCTC TTTGGGACAA GATTCTATTA ACTGCGTTAG ATCTGAACTT ACAGAAAAAA GTGAAGCTGA TACATGGGTA TGGAGGATAA AAGATATGAC TATTTCTAGT TTGAGACCGG CCACGAGAGG AGTAGAAGCA ACAGGTGTGT ACACAGGGAC ATTCAGTTTC AAAAACCTAA AACTTCTCCC TCCTCCTTTA TTCTGCTTGA AAAATATAAA ATTTGACTTG TCGAGCATGC CAAGCGAAAA CCAAACTAGA GTTTTGTTTC AAACATATTC TCCTTGGATA TATTTACACC CACAAGAAGA TTTTCTTCCT TCCTCCGTCG ATTGGGTTTT CGCTAATGGT GCGTTGCTAT ACCAGAAAGG AAACGAATCC AACCCCGTCC TGATACATCC AAATGGTTCA AACCTTCCAC AAGGTGGTTG CAATGATGAC TTATTTTGGT TAGATTATCT AGTCGATGAA AAGGCAAGAG AAAAAGTTAA GAGGGGAGAT TTAGGGAGCA CTAAGGTGTA TCTACACATT AAACCAATGT TTGGAGCTAC TTTCACAGAT ATTGTTGTAT GGCTATTCTT CCCCTATAAC GGAAATGCAC ATTTGAAATT TTTATTCATC AAGAGCATGT CGCTAGGAAA TATTGGCGAG CATGTTGGAG ACTGGGAACA TGTTACATTG CGCATCAGCA ACTTCAATGG TGAGTTATGG CGTGTTTACT TTTCTGAACA CAGTGGAGGA ACTTTAGTGG ATGCATGCGA TCTAGAGTTC ATACAAGGTG GAAACAAACC AGTAGTATAT TCGTCTCTCC ATGGCCATGC AATGTTCTCC AAACCTGGAG TCGTGTTGCA AGGCGGCGGC AAAAGTGGAA TAAGGAACGA CATGGCAAGA AGCGACAAAT TCTTTGACGC AAGTATTGGA TATGAAGTGA TTGCGGGGCC GGGCGTGGTT GAGCCACCGT GGCTGAACTA TTTTAGGAAA TGGGGACCTC GAGTCCATTA CAACATTGAC AAGTTTCTCA ACTCTGTAGC TAAGATTTTG CCCATCTTTT TACGGAAAGG TTTGCGAAAA CTCATAAACA AAATTCCTTT AGAAGTGCTT GGTCAAAATG GTCCAACTGG TCCCAAAGTT AAGAACAAAC AGAGAAATGG AAAAAAAAAG TGA 
Length1773
Protein Sequence
Protein Residue
Map Locationscaffold_3: 83143.. 85066
Download Sequence
A.thaliana
AGI-codeAT3G01880.1
DescriptionPlant protein of unknown function (DUF946)
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
4.69042 Ahg914847 Glycoprotein membrane precursor GPI-anchored
10.0499 Ahg932542 RNI-like superfamily protein
14.3527 Ahg329812 RAB GTPase homolog B1A
14.4914 Ahg358487 Protein with RING/U-box and TRAF-like domains
19.8494 Ahg889395 trehalose-6-phosphatase synthase S4
20.347 Ahg478121 Pectin lyase-like superfamily protein
22.8035 Ahg896435 terpene synthase-like sequence-1,8-cineole
25.1595 Ahg496153 AP2/B3-like transcriptional factor family protein
25.3969 Ahg473407 transposable element gene
25.6125 Ahg916353
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression