Detail


ID : Ahg933670

Blast(Query):  A.halleri   /   A.thaliana (NOT RECIPROCAL)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|933670|scaffold_401658.1
Sequence
GCTACAGACA TTGCTGAAAA AATGAGTGCA CCGGAGTCTT CTAGATTCAA ATCGAAGAAA CGATTATCGA TGGATTCTCC ATGTTCAAAA TCGCAAATCG GAAACCCTAA TCTGTCTTCT GTATTCTTAC CCACGCCGGA GAAGCCGCCG GAGAGCCCTA CTCTGGGTAA ATTCTTCGAT GCGTTGGATA GTTCGATCCT ATTATCAAAA TTGAGAGGTT CTAAGCCGAC ATTTTCCAAC ATTTCGAAGA TAATCGAGCA TTTAACCCAA AGGAGTTTTT GCTACAGTCA CTTGGCTCAA CTAAAGCATA TATTGCCTGA AGCGATCGAG ATTAAGAGAG TATTGATACA TGATGAAACA ACTTGCTGTA TGAAACCAGA TCTTCATGTT TCACTCAACG CCGATGCAGT TGTATACGAT GACAAGTCGA TATCGGAAAG TAAGAGAATC AATCTCCGGA AAGTGTTCAG GGCAAGACTT GCAGAGTTTG TTAAAACTCA TCCTCAGGGT GATGAAGTTC CAGAGGAACC GCTTCCTGAG CTATTTAATA CAAGGAAACC AAATGAAAAC TCAGAAGTTG AGGTTGGGTG TGTTAGTTCT GTCATGGAAG AGATGGCTTC TATTCCAGTA GCTAAATTGA TTTCATCTCC CATCACATCG ACTCCATCAG AGTTTAACAT CGTACATTCA ACGCCTGCTA AAATTGACTC AACACCAGTT GTTGTTGCTT CGACTCCACC TGAATTTGCT TCAACTCCTG TCCGGCTGTT TAGTACTTCA CAGGAAGCTC GCTCGCAGAA AAGAAGTAGT GGTTCTACAA ATCCAGATGA TGTTTCTGCT GACCCACCGG TTAAGCTTGT GAGGCGTTCC TTGTTGCTGA ACTTTGATTC TTGTTCTGAG GACAAGAAAG CTATGGATGT GACAGTTGAT CAGACCATTG TTCAAGTACC AGAAGATGTA TCCAGTAATG ATGAAGAAAT CCTCAGCATG CTTCCTGATA AGCTTCGACA ATCGATAAAA GATCAAGAGA TGAAAACAAA TGAGGATCAA AATCCAGCAA TCTCACTGGC AAAGAGAAGG CGAGAGATGA TCGCTTGCCT ACCTAAACTT TTCGATGTCA TCCATTACAT AATTCAGTCG ATAAGGCGTT GGGTAATCAC AAAAGAAGAG CTTGTGCACA AGATAATTGC CGGTCATTCT GATATTACCG ACAGAAAAGA AGTTGAAGAA CAACTGATCC TAATGCAAGA GCTTGTCCCG GAATGGATGT CTGAGAAAAG ATCATCAAGC GAAGATTTAC TAGTATGCAT AAACAAATTG GCATCTCCCC TAACAATTCG ATCCCGTCTA GAAGAAGAAA ACAAGCAAGA GATGGCTTCA CCGCTTTCTT GAGATCGCGG TTCCATTGGC TG
Length1412
Protein Sequence
Protein Residue
Map Locationscaffold_4: 14063954.. 14068543
Download Sequence
A.thaliana
AGI-codeAT2G31270.1
Descriptionhomolog of yeast CDT1 A
TAIR curator summaryEncodes a cyclin-dependent protein kinase. Involved in nuclear DNA replication and plastid division. Located in nucleus and chloroplast.
Alias[ATCDT1A][CDT1][CDT1A][ARABIDOPSIS HOMOLOG OF YEAST CDT1 A][ARABIDOPSIS HOMOLOG OF YEAST CDT1][homolog of yeast CDT1 A]
Gene coexpression
MR
MR Locus Description
13.4164 Ahg933537 Plant protein of unknown function (DUF641)
17.5784 Ahg950692 Haloacid dehalogenase-like hydrolase (HAD) superfamily protein
19.799 Ahg319913 Protein of unknown function (DUF626)
22.4944 Ahg934496
38.8844 Ahg942788 arginosuccinate synthase family
39.6863 Ahg907917
39.6863 Ahg913553
46.7333 Ahg920374
47.0213 Ahg483320 Leucine-rich repeat protein kinase family protein
59.8665 Ahg907307
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression