Detail


ID : Ahg934131

Blast(Query):  A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|934131|scaffold_402119.1
Sequence
GAATATTGTT TCATCCCTAC AATGGCGTCC GAGAATCTGA ATGATAAGAT CTCTGTTTTT AAGAAGCTCA AAGCCAAATC CGATAATAAG ATTTGTTTTG ATTGCAATGC GAAGAACCCA ACATGGGCTT CCGTTACTTA CGGGATCTTT CTCTGTATCG ATTGTTCTGC TGTTCATCGG AGTCTTGGCG TCCACATTAG CTTCGTCAGG TCAACCAATT TAGATTCATG GAGCCCTGAG CAATTGAAAA TGATGATATA TGGAGGAAAC AACAGGGCAC AAGTCTTTTT CAAGCAGTAT GGATGGAGCG ATGGAGGTAA AACCGAGGCT AAGTATACTT CGCGAGCTGC TGATTTGTAT AAACAGATTC TTGCTAAAGA AGTTGTTGCT AAAAGCAAGG CCGAGGAAGT ATTATTGGAT TTGCCTCCAT CTCCTCCTGT TTCATCAACA CAAGTGCCCA ATGGGCTCTC CAGCATCAAA ACCAGTGAAG CTCCTAAAGA GAGTAATAAT ACGCTAAAGC AGCAAGAAAA GTCTGAAGTT GTTCCCGTCT CACCCAGAGT TTCTCGCAGC GTTAAGAAAC CTCTTGGTGC TAAGAGGACA GGCAAAACAG GTGGACTTGG CGCCCGGAAG CTAACTACTA AGTCGAGCGA GACTCTTTAT GATCAAAAGC CAGAGGAATC TGTTGTTATA CAAGCGACTT CCCCAGCTTC AGCTAAATCA GCCAGGTCAT CGTTTTCCTC TCGGTTTGAT TATGCGGACA GTGTTCAAAA CAGAGAAGAT TACATGAGCC CTCAAGTGGT TGGTCATGTA GCTCCACCAA AATCATCAGG CTTCTTTGAG GAAGAGTTGG AGATGAACGG AGGCAGGTTT CAGAAGAAAC CAATCACAAG TTCCTCAAAA GTGCAAATTC AAGAAACAGA TGAAGCACGG AAGAAATTCA CAAACGCGAA ATCAATCTCC TCTGCTCAGT ATTTCGGAAG TGACAACAAC TCGGCCGACC TTGAGGCCAA AAGTACATTG AAGAAGTTCT CCGGTTCATC AGCAATCTCT AGTGCTGATT TGTTTGGAGA CAGTGATGGA GATTTCACTC TTGATCTCAC CGCGGGTGAT CTTCTCAACC GCCTATCTCT CCAGGCTCAA CAAGACATGT CATCATTGAA GAACATGGCA GAGGAGACAA AGAAGAAGCT TGGCTCTGTT GCTTCCAGCT TATGGGTTTG AAATGTTCAT AATTCTCTAA A
Length1241
Protein Sequence
Protein Residue
Map Locationscaffold_4: 15845804.. 15847579
Download Sequence
A.thaliana
AGI-codeAT2G35210.1
Descriptionroot and pollen arfgap
TAIR curator summaryA member of ARF GAP domain (AGD), A thaliana has 15 members, grouped into four classes.
Alias[AGD10][MEE28][RPA][MATERNAL EFFECT EMBRYO ARREST 28][root and pollen arfgap]
Gene coexpression
MR
MR Locus Description
28.8097 Ahg326432 Glycosyl hydrolase superfamily protein
29.189 Ahg481776
32.0156 Ahg476223 Polyketide cyclase/dehydrase and lipid transport superfamily protein
46.7333 Ahg894149 F-box family protein
48.4974 Ahg916200
56.1249 Virus0486
73.6478 Ahg924666 O-methyltransferase family protein
76.6812 Ahg326968 Major facilitator superfamily protein
81.878 Ahg332502 Major facilitator superfamily protein
83.1565 Ahg916063 kinesin 2
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression