| Annotation |
|---|
| Description | jgi|Araly1|934357|scaffold_402345.1 |
| Sequence |
CTTCTTCCTT AAACAGAAGG TTATGGGATC TCTAGAGAGA TCAAAGAAGA AAGCTCAAGT ATGGAAGAAA GCTGTGATCC AATTTTCTCT TTGTTTTGTA ATGGGTTTCT TCACTGGCTT TGCTCCTGCT GGTAAGGCCT CATTTTTCTC TAATTCCGAA ACCACCCCCT ATACTTCTAC AAAATCTCAA ATTTCTCCCC AACCTTTTGA AAACTCTACC TACACACCCC ATTCCCTCCT CAATAGAACC TTGACCAATT CCCAAGGCCA AGCCCCAGCT CCCGCAGAGT GGCGAGAAGC CGAAGCAGAA ACCAGATCTC TCTCCGAGAC AGAAGATGAG AACCAAGTTA AAGTGACACC AAGAGGACTA GTGATTGTTG TAACTCCAAT AATAACGAAA GATCGCTACA AAAATGTTCT TCTTAGGAGA ATGGCCAATA CATTGAGGCT AGTTCCACCT CCATTATTGT GGATAGTCGT GGAGAAACAC TCAGATGCTG AAGAAAAATC TTCATCTACA ATGTTAAGAA AGACCGGTAT CATGTATAGA CGTATAGTCT TCAAGGAGGA TTTCACAAGC TTGGAATCAG AGCTTGATCA TCAAAGGAAT TTAGCGTTAA GACACATTGA ACATCACAAA TTAAGCGGGA TAGTTCATTT CGCGGGACTA AACAACATAT ATGATCTTGA TTTTTTCGAC AAGATCAGAG ATATCGAGGT ATTCGGTACT TGGCCAATGG CATTGCTATC GGCTAATAGG AAACGAGTGA TAGTAGAGGG GCCGGTTTGT GAATCTTCAC AAGTATTGGG GTGGCATTTG AGAAAAATTA ATAACGAGAC AGAGACAAAG CCTCCGATTC ATATATCAAG TTTCGCTTTC AATAGTTCCA TACTTTGGGA CCCTGAGAGA TGGGGTCGTC CTTCTTCTGT TGAAGGCACC AAACAGGATT CGATAAAATA TGTGAAGCAA GTAGTTTTGG AGGACGATAC AAAGTTGAAG GGACTTCCGG CACAAGACTG TTCCAAGATT ATGCTTTGGC GTCTCAATTT TCCCACAAGA ACACGTTTAA GCCCCTGATA TGCTTTATTT TATTCTAATC |
| Length | 1100 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_4: 16807261.. 16808931 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT2G37090.1 |
| Description | Nucleotide-diphospho-sugar transferases superfamily protein |
| TAIR curator summary | The IRX9 gene encodes a putative family 43 glycosyl transferase. It was coordinately expressed with the cellulose synthase subunits during secondary cell wall formation. Cell wall analysis revealed a decrease in the abundance of xylan in the irx9 mutant, indicating that IRX9 is required for xylan synthesis. Mutants have irregular xylem phenotype suggesting a role in secondary cell wall biosynthesis. |
| Alias | [IRX9][IRREGULAR XYLEM 9] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 19.6977 |
Ahg332502 | Major facilitator superfamily protein |
| 45.2217 |
Ahg489473 | Cupredoxin superfamily protein |
| 46 |
Ahg481138 | basic helix-loop-helix (bHLH) DNA-binding superfamily protein |
| 48.2908 |
Ahg472970 | basic helix-loop-helix (bHLH) DNA-binding superfamily protein |
| 65.7343 |
Ahg922940 | |
| 78.2304 |
Ahg473836 | beta-galactosidase 5 |
| 80.5109 |
Ahg492981 | cellulose synthase family protein |
| 94.8683 |
Ahg472993 | microtubule-associated protein 65-8 |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
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| The four seasons |
|
|
| Growth Chamber expression |
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