Detail



ID : Ahg934727

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|934727|scaffold_402715.1
Sequence
TCGACCGAGA TTTGGGAACG ATGGGGATGG ACTTGAGGGT TGTTCCGGCG GAGGAATGGT TGAATCGAGG GAGAGATTCG AGTCATGACG GTGAACGTGA CCTAGGGCTC ATGGTTACAG ATTTTCTGGA AACGGGTGGC GGTGGAAGCG GTGGTGCTGG TTCCTGGTGT AGCAGCGATA GCGATTCTGG ATTCCCAGAT CCTTCTTACC TTTCCGATAA GATTCAGTAT CTTAAGTACT CTGTGGCTCA ACATGAAACT GAGGTTCTCT CGGCGGTTCG TACATTGATG CTGACTATTA AGGAGAAAGA TCTTCACTCT GTGAAATCCG GTACATGTAA CGCCAGTTGC ATTAGGTTTT ATCTTGCAAA GCTTTTGAGA CTTTCTGGAT ATGATGCAGC TGTTTGTTCA GCTAGATGGC AAGGCGGTGG CAAAGTTCCT GGTGGAGATA ATGAGTATAT AGATATCATA TTGAGTGATA CTGAAGTTGG CCAAGATGAT CGTTTGATTG TTGACATTGA TTTCAGAAGT CATTTTGAAA TCGCTCGAGC TGTGGATTCT TACCAACGGA TAATGGAATC ACTCCCTGTG GTTTATGTAG GAACCGTGGC AAGATTAAAC CAGTTCCTCC AAGTAATGGT TGATGCAGCT AAATTCTCCT TAAAGCAGAA TTCGATGCCG TTACCTCCTT GGAGATCTCT GAACTACCTG CGATCCAAAT GGCATTCACC TCACAAAAGG CATCTTGGTC CGATCGATCA TCAAGGTCCT GGAATGTTCT CACCTGGATT GCATGGACAG TGTGCTGAGA ATTTAAAGAG GCTTCAGTTT GCTCTCCAGG TCGAACAAGA GTCAGAGAGA TTCATGAAGA AGAGCAGCGG GTTTAGCCGC AGGAACAAAC CCGAGATAAT GAGAATTCAA GGGGCTCGTG CTCCTTAAAG AGATTGTACA GATGTTTTTT 
Length960
Protein Sequence
Protein Residue
Map Locationscaffold_4: 18244187.. 18245434
Download Sequence
A.thaliana
AGI-codeAT2G39650.1
DescriptionProtein of unknown function (DUF506)
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
8.12404 Ahg480500 Regulator of Vps4 activity in the MVB pathway protein
14.4914 Ahg492070 Calcium-binding EF-hand family protein
19.6977 Ahg495189 Integrase-type DNA-binding superfamily protein
24.6779 Ahg485608 syntaxin of plants 122
27.1293 Ahg484667 Calcium-binding EF-hand family protein
27.8209 Ahg949051 calmodulin like 37
30.8545 Ahg922666
30.9354 Ahg936606 galacturonosyltransferase-like 10
31.7805 Ahg477526 ARM repeat superfamily protein
35.242 Ahg493127 ethylene responsive element binding factor 6
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression