Detail



ID : Ahg934805

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|934805|scaffold_402793.1
Sequence
TTTTGTTGCA AGTAAGTAAA GAGCCATGGC GTCTCAGCAA GAGAAGAAGC AGCTGGACGA GAGAGCAAAG AAGGGAGAGA CCGTCGTGCC AGGTGGCACT GGAGGCAAAA GCTTCGAAGC TCAACAACAT CTCGCTGAAG GGAGGAGCCG AGGAGGGCAA ACTCGGAAGG AGCAGTTAGG AACTGAAGGA TACCAGGAGA TGGGACGTAA AGGTGGTCTT AGTACCGGAG ACAAGCCTGG TGGTGAAAAC GCTGAGGATG AAGGAGTCGA GATAGACGAA TCCAAATTCA GGACCAAGAC CTAAATCGAA CTCCCCACGG ATGT 
Length324
Protein Sequence
Protein Residue
Map Locationscaffold_4: 18576460.. 18576884
Download Sequence
A.thaliana
AGI-codeAT2G40170.1
DescriptionStress induced protein
TAIR curator summaryEncodes a group 1 LEA gene that is activated by direct binding of ABI5 to its promoter and is involved in response to ABA. Is required for normal seed development. Involved in regulating the timing of dessication tolerance and rate of water loss during seed maturation.
Alias[ATEM6][EM6][GEA6][ARABIDOPSIS EARLY METHIONINE-LABELLED 6][EARLY METHIONINE-LABELLED 6][LATE EMBRYOGENESIS ABUNDANT 6]
Gene coexpression
MR
MR Locus Description
12.3288 Ahg925246 F-box associated ubiquitination effector family protein
12.3288 Ahg906234
16 Ahg471935 MADS-box transcription factor family protein
19.799 Ahg925390
25.0998 Ahg493652 cytochrome P450, family 716, subfamily A, polypeptide 1
30.4467 Ahg892054 lectin receptor kinase a4.1
31.1448 Ahg493720 Leucine-rich repeat protein kinase family protein
32.0936 Ahg357471
32.9545 Ahg336970
33.6155 Ahg900404
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression