| Annotation |
|---|
| Description | jgi|Araly1|934902|scaffold_402890.1 |
| Sequence |
AATACTACAA ACTAAATCCT ATGTCGTGGT TTCTAATAGC GGTGGCGTTT GTCGCCGCCG TCGTATCTTA CAAGCTAATC CAAGGGCTGA GATTCAAGTT CCCACCAGGG CCACGCCCCA AGCCGATCGT CGGTAACCTC TACGACATAA AACCGGTCCG GTTCAGATGT TACTACGAGT GGGCTCAATC TTATGGACCA ATCATATCGG TCTGGATCGG TTCAATTCTA AACGTCGTCG TATCTAGCGC CGAGCTAGCA AAAGAAGTCT TGAAAGAACA CGACCAGAAA CTCGCCGACC GGCACCGGAA CAGATCAACG GAAGCATTTA GCCGCAACGG TCAGGATCTT ATATGGGCCG ATTATGGGCC TCATTACGTG AAGGTGAGAA AAGTTTGCAC GCTTGAGCTC TTCACACCTA AACGACTCGA GTCTCTCAGA CCTATCCGTG AAGATGAAGT CACCGCCATG GTTGAATCCG TCTTCAGAGA CTGTAACCTT CCTGAAAACA GAGCAAAAGG TTTACAACTG CGGAAGTACT TAGGAGCGGT TGCGTTCAAC AACATAACGC GGCTAGCCTT TGGGAAGCGT TTTATGAACG CGGAAGGTGT TGTGGACGAT CAAGGGCTTG AATTCAAGGC CATAGTATCC AACGGTCTGA AGCTAGGTGC TTCACTATCG ATAGCTGAAC ATATCCCGTG GCTCAGGTGG ATGTTTCCGG CCGATGAGAA GGCGTTTGCT GAGCACGGGG CTCGTCGCGA CCGCCTCACG AGAGCTATCA TGGAGGAGCA CACTTTGGCC CGTCAAAAGT CTAGTGGAGC GAAACAGCAT TTCGTTGATG CGTTGCTTAC GTTGAAGGAT CAGTATGATC TCAGTGAGGA TACTATCATT GGTCTTCTAT GGGATATGAT CACGGCAGGG ATGGACACGA CAGCGATAAC AGCGGAGTGG GCGATGGCGG AAATGATCAA GAATCCAAGA GTACAACAAA AGGTGCAAGA AGAGTTCGAC CGAGTGGTTG GACTTGACCG GATCTTAACC GAGCCAGATT TCTCCCGCTT ACCTTACTTG CAATGCGTGG TGAAAGAGTC ATTCAGGTTG CACCCTCCGA CGCCTCTTAT GCTCCCTCAC CGATCCAACG CAGATGTCAA GATCGGTGGC TATGATATTC CCAAAGGATC AAACGTTCAT GTGAATGTTT GGGCTGTGGC TAGAGACCCG GCTGTATGGA AAAATCCATT AGAGTTTAGA CCAGAGAGAT TCTTGGAAGA AGATGTTGAC ATGAAGGGTC ATGATTTTAG GCTGCTTCCG TTTGGAGCTG GAAGACGGGT TTGTCCCGGT GCACAACTTG GTATCAATTT GGTGACTTCG ATGATGAGTC ATTTGCTTCA CCATTTTGTT TGGACACCTC CTCAAGGGAC TAAACCGGAG GATATTGACA TGTCTGAAAA CCCTGGACTC GTTACTTACA TGCGTACACC GGTTCAAGCC TTTGCAACGC CTCGGTTGCC TTCGGATCTT TACAAACGCG TGCCTTTTGA TATGTAAATG TCACTCTCGT CTACCTTTT |
| Length | 1569 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_4: 18918821.. 18921174 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT2G40890.1 |
| Description | cytochrome P450, family 98, subfamily A, polypeptide 3 |
| TAIR curator summary | encodes coumarate 3-hydroxylase (C3H), a P450-dependent monooxygenase. Involved in lignin biosynthesis and flavonoid biosynthesis. Also affects the biosynthesis of coumarins such as scopoletin and scopolin as a branching-out-pathway from the phenylpropanoid acid level. |
| Alias | [CYP98A3][cytochrome P450, family 98, subfamily A, polypeptide 3] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 7.54983 |
Ahg481680 | P-loop containing nucleoside triphosphate hydrolases superfamily protein |
| 8.60233 |
Ahg487868 | helicase domain-containing protein / IBR domain-containing protein / zinc finger protein-related |
| 9.32738 |
Ahg483746 | transcription regulatory protein SNF2, putative |
| 10.3923 |
Ahg473977 | Stabilizer of iron transporter SufD / Polynucleotidyl transferase |
| 11.3137 |
Ahg949937 | NADH-dependent glutamate synthase 1 |
| 11.4891 |
Ahg333714 | |
| 16.7332 |
Ahg933960 | P-loop containing nucleoside triphosphate hydrolases superfamily protein |
| 19.8997 |
Ahg945184 | 26S proteasome regulatory subunit S2 1B |
| 20.567 |
Ahg950958 | MEI2-like protein 1 |
| 21.9773 |
Ahg471206 | alpha/beta-Hydrolases superfamily protein |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|