Detail



ID : Ahg935147

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|935147|scaffold_403135.1
Sequence
AAACTCAACA AGAGATCATA TCATGTCCTC TCCAAGAGAA AGAGGAAAGA ATTTGATGGA ATCATCAGGA TCAGAACCAC CGGTGACACC AAGCCGGTAC GAGTCGCAGA AGAGACGCGA CTGGAACACT TTCGGACAGT ACTTGAAGAA TCAGAGACCG CCCGTGCCCA TGTCTCACTG CAGCTGCAAC CACGTGCTTG ATTTCCTCAG GTACTTAGAC CAGTTCGGTA AGACAAAGGT TCACGTGCCT GGTTGTATGT TCTACGGCCA GCCTGAGCCA CCAGCTCCTT GCACGTGCCC TCTCAGACAA GCTTGGGGAA GTCTTGACGC TTTGATCGGA CGGCTGAGAG CGGCTTACGA GGAGAACGGT GGATCTCCGG AGACGAATCC TTTCGCTAGT GGAGCGATAA GGGTTTATCT GAGGGAGGTT AGGGAGTGTC AGGCTAAGGC TAGAGGGATT CCTTACAAGA AGAAGAAGAA GAAGAAGCCA ACGACGGAGA TGGGTGGTGG AAGAGACGAC TCTTCTTCTT CCTCCTCTTC CTTCAGCTTC TCTTAAGAGA TTCTCCATCT TCGTGA 
Length576
Protein Sequence
Protein Residue
Map Locationscaffold_4: 19816136.. 19816711
Download Sequence
A.thaliana
AGI-codeAT2G42610.1
DescriptionProtein of unknown function (DUF640)
TAIR curator summary
Alias[LSH10][LIGHT SENSITIVE HYPOCOTYLS 10]
Gene coexpression
MR
MR Locus Description
21.2132 Ahg497273
34.1174 Ahg477157 Protein kinase superfamily protein
38.3927 Ahg949843 WD-40 repeat family protein / notchless protein, putative
44.6318 Ahg324031 phosphoribosylformylglycinamidine cyclo-ligase, chloroplast / phosphoribosyl-aminoimidazole synthetase / AIR synthase (PUR5)
45.8258 Ahg476108 Homeobox-leucine zipper protein family
52.0769 Ahg477264 RAD3-like DNA-binding helicase protein
56.0892 Ahg935251 Ypt/Rab-GAP domain of gyp1p superfamily protein
65.7495 Ahg479567
76.1906 Ahg479925 KRR1 family protein
99.2724 Ahg333544 IQ-domain 18
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression