Detail



ID : Ahg935189

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|935189|scaffold_403177.1
Sequence
TTAGTAATCT CACTAGCTTA ATGTCGACCA AACTCAGTAT AATTCTTGGC CTGATTTTGT TCTCTGTCTC ACCATTTTCC GGCGACTGTA GAACTCTTTC CAGGAAACAT GATCATAACT CTTCATCCCT TTACGGCTTT AATTCCCAAG ATACGATGCG TTTCGGTTCT GTCTCTTCTT CCACAAGCAA CGATTGTGGT TTCTCCTCCA AGGAACATGA TCCTGCCAAG GAACATACCA GAGAATCGGT GAAGCTTCAT TTAAGGCGCA GGGAGATTAA ACAAGAAACA AAGAGAACAA CACACTCAGT TGTTGATCTT CAAATCCAAG ACCTCACAAG AATTCAGACG CTTCACGCAC GGTTTAAGAA ATCGAAGAAA CAGAGAAACG AGAAGGTTAA GAAGAAGATT ACTTCAGATA TTTCTTTGGT GGGAGCTCCA GAGGCTTCAC CGGGGAAGCT GATAGCAACA CTTGAGTCTG GTATGACTCT CGGTTCTGGT GAATACTTCA TGGACGTGCT TGTGGGCACA CCACCAAAAC ACTTCTCATT GATTCTTGAC ACAGGGAGTG ACTTAAACTG GCTCCAATGC CTTCCTTGCT ACGACTGTTT CCACCAAAAC GAAGCGTTTT ATGACCCGAA AACGTCCGCT TCATTCAAGA ACATAACATG CAATGACCCT AGATGCAGCC TCATCTCATC ACCCGAGCCT CCAGTACAGT GCAAATCAGA TAACCAATCG TGCCCTTATT TCTACTGGTA TGGAGACAGA TCGAACACAA CTGGAGATTT CGCGGTTGAG ACCTTCACCG TTAATCTCAC GACCACTGAG GGAAGAAGTT CAGAGTATAA GGTGGAAAAT ATGATGTTTG GGTGTGGTCA TTGGAACCGA GGTCTCTTCA GTGGTGCTTC AGGTCTGCTT GGGTTAGGGA GAGGACCTCT TTCGTTTTCT TCTCAGCTTC AGTCTCTCTA TGGCCATTCC TTTTCCTATT GTCTTGTCGA TAGAAACAGC GACACCAATG TAAGCAGCAA GTTGATATTT GGAGAAGACA AAGATTTGCT GAACCACACA AATCTGAACT TCACTTCTTT TGTGAACGGG AAGGAGAATT CTGTGGAGAC GTTTTACTAT ATACAGATCA AATCCATTCT AGTCGGCGGC GAAGCTCTGG ACATACCTGA AGAAACATGG AATATCTCAC CAGATGGTGC TGGTGGAACC ATCATTGATT CCGGGACAAC CTTAAGCTAT TTCGCAGACC CTGCATATGA GATCATAAAA AACAAGTTTG CAGAGAAAAT GAAAGAGAAC TACCTGGTGT TTAGAGATTT CCCGGTCCTT GATCCTTGCT TCAATGTATC TGGCATAGAG GAGAACAACA TCCATCTGCC GGAGCTCGGG ATTGCATTTG CAGACGGCGC AGTTTGGAAT TTCCCTGCTG AGAACTCCTT CATTTGGTTG AGTGAGGATT TGGTTTGCTT GGCAATTCTA GGAACTCCTA AATCTACATT CTCGATCATC GGAAACTACC AACAACAGAA TTTCCATATA CTCTATGATA CAAAGAGGTC TAGGCTAGGG TTTACACCCA CAAAGTGTGC GGACATATAA CCTCATGTAT TATAAACACA 
Length1630
Protein Sequence
Protein Residue
Map Locationscaffold_4: 19979481.. 19981110
Download Sequence
A.thaliana
AGI-codeAT2G42980.1
DescriptionEukaryotic aspartyl protease family protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
10.583 Ahg337560 GDSL-motif lipase 3
13.5277 Ahg935659 D-arabinono-1,4-lactone oxidase family protein
17.6068 Ahg918583 Auxin efflux carrier family protein
22.0227 Ahg477692 Kunitz family trypsin and protease inhibitor protein
23.1517 Ahg900448
23.2379 Ahg497078 NAD(P)-binding Rossmann-fold superfamily protein
29.2233 Ahg478237 laccase 7
33.0908 Ahg327109 Peroxidase superfamily protein
36.9053 Ahg949254 glutamate receptor 1.3
37.3095 Ahg933337 C2H2-type zinc finger family protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression