Detail



ID : Ahg935500

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|935500|scaffold_403488.1
Sequence
TTTTACTTTT GAATCAAGAA ATGGATCAGG TCTCTCGCTC TCTTCCTCCA CCTTTTCTCT CAAGAGATCT CCATCTTCAC CCGCACCATC AATTCCAGCA TCAGCAGCAG CAGCAACAGA ATCACGGCCA CGATATCGAC CAGCACCGAA TCGGTGGCCT AAAACGTGAC CGGGACGCTG ATATCGATCC CAACGAGCAC TCTTCAGCCG GAAAAGATCA AAACACTCCT GGCTCCGGTG GAGAAAGCGG CGGCGGAGGA GGAGGAGACA ATCATATCAC GAGAAGGCCA CGTGGCAGAC CAGCGGGATC CAAGAACAAA CCAAAACCAC CAATCATCAT CACTCGAGAC AGCGCAAACG CTCTCAAATC TCATGTCATG GAAGTAGCAA ACGGATGTGA CGTCATGGAA AGTGTCACCG TCTTCGCTCG CCGTCGCCAA CGTGGCATCT GCGTTTTGAG CGGAAACGGC GCCGTTACCA ACGTTACCAT AAGACAACCA GCTTCAGTAC CTGGTGGTGG CTCATCTGTC GTTAACTTAC ACGGACGTTT CGAGATTCTT TCTCTCTCGG GATCTTTCCT TCCCCCTCCG GCTCCACCAG CTGCGTCAGG ACTAACGATT TACTTAGCCG GTGGTCAGGG ACAGGTCGTT GGAGGAAGCG TGGTTGGTCC ACTCATGGCT TCAGGACCAG TAGTGATTAT GGCTGCTTCG TTTGGGAACG CTGCGTATGA GAGATTGCCG TTAGAGGAAG ATGATCAGGA AGAGCAAACG GCTGGAGCGG TTGCCAATAA TATCGATGGA AACGCAACGA TGGGTGGTGG GACGCAAACG CAGACTCAGA CGCAGCAGCA GCAGCAACAA CAACAACAGT TGATGCAAGA TCCGACGTCG TTTATACAAG GGTTGCCTCC GAATCTTATG AATTCTGTTC AATTGCCAGC TGAAGCTTAT TGGGGAACTC CGAGACCATC TTTCTAAATC GCGGAAAAAA AAAACAAGT 
Length999
Protein Sequence
Protein Residue
Map Locationscaffold_4: 20993939.. 20994934
Download Sequence
A.thaliana
AGI-codeAT2G45430.1
DescriptionAT-hook motif nuclear-localized protein 22
TAIR curator summaryEncodes a nuclear localized AT hook domain containing protein that can bind AT rich DNA in vitro. Overexpression of the gene results in delayed flowering. Is likely to act redundantly with AHL18, AHL27 and AHL29 in the regulation of flowering. It is also involved in both photo- and skotomorphogenesis.
Alias[AHL22][AT-hook motif nuclear-localized protein 22]
Gene coexpression
MR
MR Locus Description
15.0333 Ahg316947 Pectin lyase-like superfamily protein
21.2132 Ahg338146 KNOX/ELK homeobox transcription factor
22.5832 Ahg947612
23.0217 Ahg895151 Protein of Unknown Function (DUF239)
24.8998 Ahg924128 cytochrome P450, family 708, subfamily A, polypeptide 1
27.1293 Ahg897183 Polynucleotidyl transferase, ribonuclease H-like superfamily protein
27.2764 Ahg333172 cytochrome P450, family 706, subfamily A, polypeptide 3
27.5681 Ahg483920 Signal transduction histidine kinase
27.9285 Ahg899865 flavonol synthase 5
27.9285 Ahg929953
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression