Detail


ID : Ahg935681

Blast(Query):  A.halleri   /   A.thaliana (NOT RECIPROCAL)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|935681|scaffold_403669.1
Sequence
TTTTCCTCTT TGTTTCTTTT GATGGAGTTT CTGAGCACCT CTTTGTTTCT TTTGATGGAG TTTCTGCTTG TTGTTGTTCC AAAGATATGG GAATGTTGTC GGATCCTTGT TTGGCGGCCA TTGATGCTAT CAAGAAGGTT CAAGAAACAA GGAATATCAG GTCCTAAATA CAGCCTCTTT TACGGAAACA TGAGGGAGAT AAGAAAGATG AAGATAGACC CAACACCAAC AATATTTTCC CTCGCGTTTT TCCTCATTTT CAGAGAAACA TTTCTCTACT GGAATGGAAC AGAGCCGACG ATATGCACCT CAGATCCTGA ACTAGCTAAA CAAATCTTGT CGAGCAAGTT AGGTTTTTCG GTTAGATCAA AGAGGAGACC GGAGTTGCTC ATATTTTTCG GTAAAGGACT TTCCTTCTCT GAGGGTGCTG ATTGGGTTCG CCATAGAAGA ATCTTGAACC CTGCATTCTC CACTGACCGG CTTAAGGTCA TGACGAAATC GATGGTGGAT TGCACATTGA GGATATTCGA GGAGTGGAGA AAACAGAACA AATATGAAGA AACAGAGCAA AATGTGATGA AGATGGAGAT GAAGAAAGAG TTTTATCGAT TAACCGCTGA TATTATAGCG ACCACTGCGT TTGGAAGCAG TTACGCCGAA GGAAATGAAA TCTTTAGAGC ACATGTAGAG CTTCGGAATT GTTGTGTTAC TTCTGCCACC AAAGTGTTCA TCCACGGAAA ACAGTACCTT CCTACACCTT TGAATCTTCG TATATGGAAG CTCGATAGGA AAGTAAAGAA CATGATCAGA AGAATCATTG ATACTAGGCT AAAATGGAAG AATCATGGAG ATGATGATCT TCTAGGAATC ATGTTAAACG CTGCAACCTC TGAAGATCCC GAGAAAAAGT TGAGCATAGA TGAGATCATA GAAGAATGCA AAAATTTCTT CATATCAGGA CACGGAACTA CTTCGATTTT ATTGGCATGG ACTACGATGT TGCTTAGACC CATAATTCAA ATGTCTCGAG TGGCAACACA AGATATGAAT GTAGGACGCG TGGAGATCCC CAAGGGAACG AGCATAATCT TCCCGTTGCT GAAGATGCAC AGCGACCGAG ACGTTTGGGG AGATGACGCC GACAAATTCA ATCCCCTGCG ATTTGCAAAC GGCGTTTCTC AGGCCGCTAA TAACCCAAAC GCTCTCCTCG CGTTCTCATT CGGACCAAGA GCTTGCATTG GCCAACACTT TGCCATGATG GAAGCTAAGA CTGTGCTTAC TATGATTCTT CAACGGTTCC GGCTTAACCT CTCCCGCGAG TATAAGCACG CTCCGATGGA TTACATCAGT CTCCATCCAC AGTACGGCTT ACCCATAATG GTTAAGCCTC TCCACATTTG AATTAAATCC CCCCAAAAAA A
Length1421
Protein Sequence
Protein Residue
Map Locationscaffold_4: 21654303.. 21656263
Download Sequence
A.thaliana
AGI-codeAT2G46960.2
Descriptioncytochrome P450, family 709, subfamily B, polypeptide 1
TAIR curator summarymember of CYP709B
Alias[CYP709B1]["cytochrome P450, family 709, subfamily B, polypeptide 1"]
Gene coexpression
MR
MR Locus Description
3.74166 Ahg895875
4.69042 Ahg926161
5 Ahg935111 lateral organ boundaries-domain 16
6.78233 Ahg359012 RHO guanyl-nucleotide exchange factor 9
11.6619 Ahg937916
15.4919 Ahg910584 Protein of unknown function (DUF1685)
16.2481 Ahg327610 Pectin lyase-like superfamily protein
20.2978 Ahg911831
21.9089 Ahg315475 SCR-like 2
30.249 Ahg927977 Kunitz family trypsin and protease inhibitor protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression