Detail



ID : Ahg936345

Blast(Query) A.halleri   /   A.thaliana (NOT RECIPROCAL)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|936345|scaffold_500536.1
Sequence
GATGTGTCTC TATTTTGGCC CTAAACTCAA GAGTCGACTA TGTTCCTAAA GTGCTCTCTC TCCTTTTGAT ATGTTGATCC CTATGGAAAC CTTGTGCTTG GTTGGTTTGA GACAATTTGA GATGTGCTAC TTTATGCTTA TCGTAATGAA TGCGTGGGTT ATCCCCCAAC ACCAAATTTG CAAAAGCCTC AGGTACGTGA TTGATCTCTA CGGAATATCC AGGATCAACA TTTGGTAAAA TTCAAATGTT GTTATATTT 
Length259
Protein Sequence
Protein Residue
Map Locationscaffold_5: 2643008.. 2643266
Download Sequence
A.thaliana
AGI-codeAT3G26420.1
DescriptionRNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like domain
TAIR curator summaryZinc finger-containing glycine-rich RNA-binding protein. Cold-inducible. Contributes to the enhancement of freezing tolerance.
Alias[ATRZ-1A][RZ-1A][RZ-1A]
Gene coexpression
MR
MR Locus Description
21.4009 Ahg493259 RNA polymerases M/15 Kd subunit
25.1595 Ahg318005 protein arginine methyltransferase 3
36.9865 Ahg942897 mRNAadenosine methylase
46.0869 Ahg493833 RNA binding Plectin/S10 domain-containing protein
48.8569 Ahg490265 oxidoreductase, 2OG-Fe(II) oxygenase family protein
64.8999 Ahg920450 periodic tryptophan protein 2
66.0681 Ahg487826
74.1755 Ahg938693 Glycosyl transferase family 4 protein
74.4446 Ahg929422 RING/U-box superfamily protein
82.8493 Ahg494541 methyltransferases
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression