Detail



ID : Ahg936444

Blast(Query) A.halleri   /   A.thaliana (NOT RECIPROCAL)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|936444|scaffold_500635.1
Sequence
TCCCGCCTTT TTATTTGGAT AATGTTAGTC CTATTTTTTT TGTTTCATCT CAGAGATGTC TTGTGCTCTG AAAGGTACTT TGTTCCCGAC AGTAATATAG GCCTCGCTTG GTTAGCATCG ACAGTAATAT GTTACAGATG CCCTCAGAAA AAGACTGAGG AGGAAGATGA TAAACTGATT ACTGAGCTAC ACGAAGATTG CATGGAATTG CTGGGACTGG TTTCAGTTGA AGACATGTGG CAGCAGGTTT CTCCTCTATA CTCCTACGAT ATTAATGTTT TAGTATTGAA ACCATCTTGC AGCTTCGCGT TATTGATCCT CTCTAGGTTG GTTCAACTAC TCTTTGCTGT CCGAGCTACT CTTTCTTCTC TACCTGACGA GGTTGTTGAT ACTGTTGGTA TTACTTCTCT GCCAGCTGAA GACCCTGTTT CTGAGCGAAC AAGGACATTA GAGTACCTTG ATATGCAAGA AGAACTGATC ATACACCACT TGACTTTTTT GGATTATGCT TTTCTTGACA TATTATATAG TATAACGTAA CCAAGTGTTC TTGGTCTAGT 
Length560
Protein Sequence
Protein Residue
Map Locationscaffold_5: 3272543.. 3273180
Download Sequence
A.thaliana
AGI-codeAT3G59820.2
DescriptionLETM1-like protein
TAIR curator summary
Alias[AtLETM1][LETM1][leucine zipper-EF-hand-containing transmembrane protein 1]
Gene coexpression
MR
MR Locus Description
1.41421 Ahg949041
4.89898 Ahg483242 RING/U-box superfamily protein
5.09902 Ahg907989
7.07107 Ahg948102 TRAF-like superfamily protein
7.87401 Ahg895628 Ubiquitin-like superfamily protein
8.7178 Ahg942774 serpin 3
10.3923 Ahg330989
11.4018 Ahg313705 basic helix-loop-helix (bHLH) DNA-binding superfamily protein
11.7473 Ahg480397
12.6095 Ahg923568
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression