Detail



ID : Ahg936753

Blast(Query) A.halleri   /   A.thaliana (NOT RECIPROCAL)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|936753|scaffold_500944.1
Sequence
CAATAAAAGA ACCATCTTTT ATGACTGAGA TTGTTGAGGA ACATGAGAAT GAGATGGATG AAGCTGCAAT GAGCTTGGTT ATGTTTTCTG AACAAGTTTA TGACTTTGAT TTGCCTCCTA ATGATGATGA TGATTCCATG GATTTAGATC AGCTCACACC TATACAAGAG AAGATCTTAG ATTGTGTTGA GTGGATACCA TCTCACTCGG GTTTCGAAAA GTCTACAACT TGCAGTGATG TTGTTGCTGC TCAAGCATTA CCTAAATTGC AGAGTAACTC AAGTCGTAAA TGCAATATAT GTGGAAAGAT TTTTGGGTGT TATCAAGCTT TAGGTGGCCA CCAAAGAGTT CACAGACCGA TTAGAGGGAA ACTAGCGCGT AAAAGGGAGT ATACTGAAGA TGATAATTCA TTGTTTGAGT CATCAGATGC TAAGAAGATT GTTTCAAAAC CATCAAATTT TGAAGTCTCT AAGGTGGAGA AGATCTTAGA TTGTGTTGAG TCGAAACAAG GGTTCAGCGA ACTGCTTCCT CGGAATAGTA AGTCGCTGAA AATACCTGAG AGTAGCTCCT GCTATGAATG TAAGATATGT GGAAAGAGTT TTGGGTGTTA TCAAGGTCTA GGTGGCCACA CAAAACTTCA CAGATCGATG AAAGGGCAAT TGGCGCATAC TGAGGATAAT AATTCACTGT TAGACTCATC AGAAGCTAAG AAGATTGTTT CAGAACCATC ATGCTTTGAA GTCTCTCCGG ATGAGAAAAG CTTACATTGT GTTGAGTTAA AACAAGACTT CAGTGAACTG CTTTCTCATT CGGGTGCATT ACCTTCTACC CTGAGAAGTA AATTGCAGAA AAAAACTCAG AGCAAATCAA GCTGTGATTG CAAAATATGT GGGAAGAGTT TTGTGTGTTC TCAAGCTCTA GGTAATCACA AAAGAGTTCA TAGACCGATA AATGGGAAAT TAGCGCGTAA AAGGAAGTAT ACTGAAGATT ATAATCCACT GTCTGACTCA TTAGAAGCTA AGAAGATTGT TTCGGAACCA TCAAGCTTTG AGGTTTCTCA GGAGAAAAGC TTACATTGTG TTGAGTTAAA ACAAGACTTC GGTGAACTGC TTGCTCACTC GGGTTTCGAC AAGTCTATTA GTTGCAGTAA CACCAGGTTC ATTCCATTAC CTTCTTCCCT AAGAAGTAAA ACACACTCCA ACATATCGAT TAAAGGGAAA TTAACGCGTA AAAACGAGAA TACTGAAGAT GGTAATTCAC TGTTTGGCGT GAATGACTCA GAAGCTAGCA AGTTTGCTTC ACTATCATCA AGCTTTGAAA TCTATCAGGA GAAGACCTTA CATTGTGTTG AGTCGAAACA AGACTTCAGT GAACTGTTTT CTCACTCGGG TTTGGATAAG TCTACTTGTT GAACAATAAA GGATATGTTT GG 
Length1432
Protein Sequence
Protein Residue
Map Locationscaffold_5: 5315967.. 5317155
Download Sequence
A.thaliana
AGI-codeAT3G29340.1
Descriptionzinc finger (C2H2 type) family protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
4 Ahg930482
4.24264 Ahg916283 Defensin-like (DEFL) family protein
4.58258 Ahg476179 Plant invertase/pectin methylesterase inhibitor superfamily protein
6.32456 Ahg941603
7.74597 Ahg951084
8.7178 Ahg495523 C2H2 and C2HC zinc fingers superfamily protein
9.16515 Ahg889930 xyloglucan endotransglucosylase/hydrolase 26
14.2829 Ahg887549 VQ motif-containing protein
14.6969 Ahg330513
14.9666 Ahg947103 histone H2A 4
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression