Detail


ID : Ahg936826

Blast(Query):  A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|936826|scaffold_501017.1
Sequence
GAAGAAGCGG GCTAGTCCCC GAAAATGCCC GTTAATAAAG CAAGTTGGGG AAAAAATCGT AGTTCAGATT CAAGTCGGTT CAGTGAGGGC GACCGCGAAA GTATAAATGC TATAAGCATA GAAAAACTTC TCGTAATGTA TTTAACCAGA AAATCGATTA TGCTCCTGCG GAAGTATCTA CTCGTTACGG AATCTCAGGT GTCAAAGTAT GGATTTCATA TAGTCAAAAA AAAGGGGGAC GTGCTATATC CGAAACGTAC GAAATATAGT AAATATCGTA AAGGCAGATG TAGTAGGGGT TGCAAACCGG ATGGTACAAA ACTGGGTTTT GGAAGATATG GCACTAAAAG TTGTAAAGCT GGTCGTCTTT CATATCGAGC CATTGAAGCA GCGCGTCGGG CTATAATCGG ACACTTACAT CGTGCTATGA GCGGACAATT CCGAAGAAAT GGTAAGATAT GGGTAAGAGT TTTCGCGAAT CCCCCAGCAC TGTTGGGGGG GTTCTATTAC TTTCTTGTTT TCATAGCCCC GAAGTTAGGG CGAGTTCTCT TATTATTGAG ACTCTCGTTC TGTCTTCTTG GGCTTCTGGA AACCCCCACT TTATTTGTCG TTCCACATGT GGACCTGCCT GCCGCCGATA CGGAGGGTAA CGAGATTGCT CTCAATCCCT CCGTATCGTC GTTGTACAAC GAAATTGAGA GTTCCGACTC TTTACGAGCA CGGAATCTCC AATTGGCGGA GTCTTGGGAA CGGGTCGAGG GGACGGAACG GGCCCTCCAG AACGAGGGGG ATCCAGGCCG ACGTCGGGAA TTAACGGCGC GCCTGGATCA GGAAATTAGA TCACTCCAAC GCCAAATCCA TCTCGGTCGA AGAGCTGATT CCATTCGGGA TCGGCAAATC GCCGAGTGGA GGGGAAGGTT TAATACGGAG TTAGCAAGGG TAGAGGAGGA AAGCGCACGC CGTGCGTTCC TTAATTGGTG TCTCCGTGTG CTCATCCATG CACACGAGCA CCAACCCCCC CAGAACTAAA TCCGTTCTTT CGTTCTCTT
Length1049
Protein Sequence
Protein Residue
Map Locationscaffold_5: 6391785.. 6392833
Download Sequence
A.thaliana
AGI-codeATMG00080.1
Descriptionribosomal protein L16
TAIR curator summaryencodes a mitochondrial ribosomal protein L16, which is a constituent of the large ribosomal subunit
Alias[RPL16][ribosomal protein L16]
Gene coexpression
MR
MR Locus Description
2.82843 Ahg319376 NADH dehydrogenase subunit 4
8.06226 Ahg473737 Protein precursor Ycf15, putative, chloroplast
8.06226 Ahg493595 Protein precursor Ycf15, putative, chloroplast
9.48683 Ahg487116 Transcription factor DP
9.48683 Ahg922803 Ribosomal protein S7p/S5e family protein
10.583 Ahg474546 E3 Ubiquitin ligase family protein
11.0905 Ahg319380 Nucleic acid-binding, OB-fold-like protein
17.5499 Ahg356389 cytochrome oxidase 2
20.199 Ahg474126 Xanthine/uracil permease family protein
23.4734 Ahg949798
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression