Detail



ID : Ahg937207

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|937207|scaffold_501398.1
Sequence
ACTCTCTGTT TTTGTTAGAA ATGGCTCAAG GATTGCATCT GATGTGGGTG ATCTTCTGTG TTCATCTGAT TTGCGTCTCA AGTCAACAGG AGACAGAGTT TATCTACAAT GGCTTTGGCC AAGAAGATCT TTATACTGAT GGGGTTGCCA AAATTCTTCC TAAAGGACTG TTGCAGTTGA CCGATGGTTC CGGACAGAAA ATGGGTCATG CCTTCTTCAA GAAGCCTTTT GAGTTCAATT CATCTGAATC ATTCTCTTTC TCAACACATT TTGTGTGTGC GCTGGTGCCT AAGCCAGGAT TTATTGGTGG TCATGGCATT GCCTTTGTTT TATCTGCTTC CATGGATCTC ACACATGCAG ACGCAACACA GTTCTTGGGA CTTTTTAACA TCTCGACTCA AGGATCCCCT TCTTCTCATC TAGTTGCTGT TGAGCTAGAC ACTGCCCTCA GTGCTGAGTT TGATGACATT GATGCCAATC ATGTTGGAAT TGATGTCAAT AGCCTTATGT CTATCGCATC TACTTCGGCG GCTTACTTTT CCGAGATAGA TGGGGAGAAC AAAAGCATAA AGCTTTTAAG TGGAGATCCT ATTCAAGTTT GGGTGGACTA TGGAGGAAAT GTACTTAATG TTACACTGGC CCCTCTTAAA ATTCAGAAGC CAAGCCGGCC TCTTTTGTCA AGATCCATCA ACCTTTCAGA AACATTTCCA GATAGAAAGT TCTTTCTTGG GTTCTCTGGA GCAACAGGGA CATTGATCAG CTACCAATAC ATACTCGGGT GGAGTTTTAG CAGAAACAAG GTGTCATTGC AGACCCTTGA TGTCACTAAA CTTCCTCGAG TTCCTCATCC TAAGGCTAAA AATAAGAGAC CATCAGGGGT GCTTATTGTT CTGCTCATTT TTCTGGCAAT CATAGTATTT TTGGCTCTTG GAGCAGCTTA TGTTTACAGG AGAAGGAAAT ATGCAGAAAT AAGAGAAGAA TGGGAAAAAG AATATGGTCC ACACCGTTTT TCTTATAAAG ATCTGTACAC TGCAACGAAT GGGTTTAACA AGGATGGACT TCTTGGAAAA GGAGGTTTTG GAAAAGTTTA CAAAGGAACT CTGCCTTCCA AAGGACAAAT AGCAGTGAAA AGAGTGTCCC ACGATGCAGA GGAAGGGATG AAGCAGTTTG TGGCTGAAAT CGTGAGCATG GGCAATCTGA AGCACAAGAA TATGGTTCCA CTTCATGGGT ATTGTAGAAG AAAAGGTGAG TTACTTCTGG TATCTGAATA CATGCCCAAT GGTAGTCTTG ACCAATACTT ATTCAATGAC GAAAAACCGC CATTTTCATG GCGTCGAAGA CTTGTAATCA TCAAGGATAT TGCTTCTGCT CTCAATTACA TGCATACAGG AGCTCCCCAA GTTGTTCTCC ACCGGGATAT CAAGGCTTCT AATGTTATGT TAGACGCTGA ATTTAATGGA AGGTTAGGGG ACTTTGGTAT GGCAAGGTTT CATGATCATG GGGCAGACCC TGCTACAACT GCTGCTGTGG GAACCATTGG CTACATGGCA CCAGAGCTTT CTACAGGGGG AGCTTGCACG GCCACTGATG TGTATGGCTT TGGTGCCTTT TTACTTGAAG TAACATGTGG GAGGAGACCT GTGGAACCTG GGTTGCCAGC TGAAAGATGG TATCTAGTTA AGTGGGTCTG CGAATGTTGG AAAATGGCTT CTTTGCTCGG AGCTAGAGAT CCAAGAATGA GAGGTGAAAT CTCAGCTGAG GAAGTTGAAA TGGTACTGAA ACTAGGGTTG CTTTGCACAA ATGGTGTGCC AGAACTGAGA CCTTCTATGG AAGACATTAT TCAATACTTA AACGGAAGCT TAGAGCTGCC TGATATCTCT CCAAATTCTC CTGGTATCGG GTCCTTTACC CCGCTGATTA TCGGATCTAA CCCCCTCCCT GTCTCCCCCA GTACCAACAC CTTCTACTCT TCTTCCTCAG CCAACGACTC TACATTTGTC ACTCACTCGA TTGTCCATGG GCATGGACGG TAAACTTTGC TCATTCTGCT TGT 
Length2053
Protein Sequence
Protein Residue
Map Locationscaffold_5: 11390511.. 11392560
Download Sequence
A.thaliana
AGI-codeAT3G45440.1
DescriptionConcanavalin A-like lectin protein kinase family protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
29.7993 Ahg916555
29.8329 Ahg496818 Pentatricopeptide repeat (PPR) superfamily protein
39.975 Ahg901222 homeobox-3
45.6837 Ahg325857 FtsJ-like methyltransferase family protein
62.3859 Ahg896275
68.9348 Ahg940612 1-deoxy-D-xylulose 5-phosphate synthase 3
81.148 Ahg486927 cation exchanger 4
97.5705 Ahg357417 Protein kinase superfamily protein
98.1835 Ahg921700 ENTH/VHS/GAT family protein
99.6394 Ahg946342 Pentatricopeptide repeat (PPR) superfamily protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression