| Annotation |
|---|
| Description | jgi|Araly1|940612|scaffold_601156.1 |
| Sequence |
TTTTCGAGGC TTTTCTCTTC ATGGGTTCGG CTTCGATTGG TTACCAAATC GGAATCTCAG CTCGATTTTA CGGGAATTTT AATTTGAGCT CAGATGTTAC TGTTTCCTCG CTTCCATGTA AAGTTGATGT TTCCATAAAG AGCCTATTCT CAGCTCCAAG CTCCACTCAC AAGGAATGTT CAAATCGAGC TCGGGTATGT TGTTCTTTGC CAAATACTGA TGAGTACTGC GATGAGAAAT TTGAGACGCC AATACTAGAC AGCATTGAGA CTCCATTGCA GTTGAAGAAT TTGAGTGTTA AGGAGTTGAA GCTATTAGCT GATGAAATCC GTACAGAGCT TCATTCTGTA TTATGGAAGA AGACCCAAAA GTCTATGAAC CCTAGCTTTG CTGCTATAGA GCTTACCCTT GCTCTGCATT ATGTTTTTCG TACCCCGGTT GACAATATAT TGTGGGATGC TGTGGAACAA ACATATGCAC ATAAAGTCTT GACACGACGC TGGTCTGCAA TACCATCGAG ACAAAAGAAC GGTACTTCTG GGGTCACTTC TCAATTGGAG AGTGAATATG ATTCTTTTGG GACCGGTCAT GGCTGCAACA GTATTTCTGC TGGGCTCGGA TTAGCGGTTG CTCGAGATGT AAAAGGAAAG AGGGACAGAG TTGTTGCTGT GATAGACAAT GCGACAATAA CTGCTGGTCA AGCATATGAG GCAATGAGCA ATGCTGGTTA CTTAGATTCT AATATGATTG TTATACTAAA TGATAGCCGT CACTCTTTAC ATCCAAATAT GGAGGAGGGA TCCAAGGCAT CCATCAGCGC ACTTTCTAGC ATCATGAGCA AAATCCAATC TAGCAAAATT TTCCGGAAAT TTAGAGAACT GGCAAAAGCT ATGACGAAAA GAATTGGAAA GGGCATGTAT GAATGGGCAG CAAAAGTCGA TGAGTATGCA CGAGGTATGG TTGGACCAAC AGGATCAACT CTCTTTGAAG AACTTGGTTT GTACTACATT GGTCCTGTTG ATGGACACAA CATTGAAGAT CTAGTTTGTG TTCTCCGAGA AGTATCTTCT CTAGATTCAA TGGGTCCTGT GTTGGTCCAC GTGATCACTG AGGAAAATCG AGATGCAGAA ACCGGAAAGA ACATCGTGGT CAAAGACAGA CGCTCTTACA GTGATTGCTT TGTTGAGGCT TTGGTGATGG AGGCAGAAAA GGATAGAGAT ATTGTTGTTG TTCATGCAGG AATGGAGATG GATCCATCAC TTCTTACATT TCAGGAGAGA TTTCCAGACA GGTTTTTCAA TGTCGGAATG GCTGAACAGC ATGCTGTCAC ATTCTCTGCT GGTCTTTCTT CTGGAGGCCT CAAGCCCTTT TGTATTATTC CCTCTGCTTT TCTACAAAGA GCTTATGACC AGGTGGTCCA TGATGTAGAT CGGCAGAGAA AGGCGGTGCG ATTTGTTATT ACAAGCGCAG GGCTTGTTGG ATCTGATGGT CCAGTGCAAT GTGGAGCTTT TGATATAGCT TTCATGTCAT CCTTACCAAA CATGATAGCC ATGGCTCCAG CCGATGAGGA TGAGCTTGTA AATATGGTTG CAACTGCAGC TTATGTCACT GACCGCCCAG TTTGTTTCCG GTTCCCTAGA GGCTCCATCG TCAACAGGAA TTATCTTGTC CCCACTGGAT TACCAATTGA AATCGGAAGA GGAAGAGTTC TCGTAGAAGG TCAAGATGTG GCTTTGCTTG GGTATGGAGC CATGGTTCAG AATTGTCTTC ATGCTCACTC GCTTCTCTCA AAACTGGGTT TGAACGTGAC TGTAGCTGAT GCAAGATTTT GCAAACCGCT AGACATCAAG CTTGTGCGTG ATCTTTGTCA GAACCACAAA ATCCTCATCA CGGTTGAAGA AGGCTGTGTT GGAGGGTTTG GTTCTCATGT GGCGCAGTTC ATAGCCCTCG ATGGCCAGCT CGATGGGAAT ATCAAGTGGA GACCGATTGT GTTACCAGAT GGCTACATCG AAGAAGCATC GCCTAGGGAG CAGCTTGCTC TTGCCGGGCT AACTGGACAT CACATAGCAG CAACCGCTCT GAGTCTTTTG GGACGAACTC GGGAAGCATT GCTTCTCATG AGCTAGCTTA ACCTTCACAA GAAGCT |
| Length | 2146 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_6: 4387665.. 4390796 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT5G11380.1 |
| Description | 1-deoxy-D-xylulose 5-phosphate synthase 3 |
| TAIR curator summary | Encodes a protein postulated to have 1-deoxy-D-xylulose 5-phosphate synthase activity. |
| Alias | [DXPS3][DXS3][1-deoxy-D-xylulose 5-phosphate synthase 3][1-deoxy-D-xylulose 5-phosphate (DXP) synthase 3] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 5.47723 |
Ahg470396 | |
| 11.6189 |
Ahg495386 | DNAJ heat shock N-terminal domain-containing protein |
| 11.8322 |
Ahg495559 | Ypt/Rab-GAP domain of gyp1p superfamily protein |
| 13.784 |
Ahg941275 | Protein of unknown function (DUF1005) |
| 21.5407 |
Ahg935990 | alfin-like 6 |
| 22.6936 |
Ahg472755 | Agenet domain-containing protein |
| 29.0861 |
Ahg481031 | Sec23/Sec24 protein transport family protein |
| 33.4066 |
Ahg324227 | N-acetylglucosaminyl transferase component family protein / Gpi1 family protein |
| 33.6898 |
Ahg485499 | glutamate receptor 3.6 |
| 33.8231 |
Ahg326131 | |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|