| Annotation |
|---|
| Description | jgi|Araly1|937399|scaffold_501590.1 |
| Sequence |
TTAAAGCTTA ATCACCGGAA AATGTTTCTA TCCCACCCTC CTCAAGTAAT ACAACCAAAT TATTACACAG TTAACTTCTT ACCTCGCTCT CCTCTGAAGC CACCGTTGTG TTCCGTTGCT TTAAACAATC TTTCGATTTC TTCCGGCGCC GGAGCTAAAC TCTCTAATAA TCAGCTAATT CAATCATTGT GCAAAGAGGG TAAACTTAAA CAAGCGCTTC GCGTCTTGTC TCAAGAATCT AGCCCGAGTC AACAGACTTA CGAGCTTCTG ATTCTCTGTT GCGGTCATCG GAGCTCTCTT TCTGATGGTC TACGTGTTCA TCGACATATT TTGGATAATG GGTCTGATCA AGATCCTTTT TTGGCTACGA AGCTTATTGG TATGTATTCG GATTTGGGTT CTGTGGATTA TGCACGGAAG GTGTTCGATA AAACGCGTAA AAGAACTATA TATGTCTGGA ACGCTTTGTT TCGAGCGCTT ACGTTAGCGG GTCATGGAGA AGAAGTGTTG GGTTTGTATT GGAAGATGAA TAGGATTGGA GTTGAGTCAG ATAGGTTCAC ATACACTTAC GTTCTCAAGG CTTGTGTTGC ATCGGAATGC ACGGCGGATC ATCTGACGAA AGGGAAAGAG ATTCATGCAC ATCTTACTCG ACGAGGTTAC AATTCTCATG TTTACATCAT GACTACGTTG GTGGACATGT ATGCTCGATT TGGCTGTGTG GATTATGCCA GCTATGTGTT TAATGGAATG CCGGTGAGGA ACGTTGTTTC TTGGAGCGCT ATGATTGCCT GCTATGCAAA GAACGGGAAA GCTTTTGAAG CTCTGAGGAC TTTCCGTGAA ATGATGACCG AAACTAAAGA TTCATCTCCG AATTCTGTGA CTATGGTTAG TGTGCTTCAA GCTTGTGCTT CGCTTGCGGC TTTAGAGCAA GGGAGATTGA TTCATGGGTA CATACTCAGA CGGGGGCTTG ACTCCATATT ACCGGTGATC AGTGCTCTTG TGACAATGTA TGGTAGATGC GGTAAGCTCG AAGTGGGACA GAGAGTATTT GATCGAATGC ATGACAGGGA TGTTGTATCC TGGAATTCCT TGATATCAAG CTATGGCGTT CACGGGTATG GAAGGAAAGC AATTCAGATA TTTGAAGAGA TGCTCGCCAA TGGGGCTTCT CCAACTCCCG TAACATTTGT CAGCGTTTTG GGGGCTTGCA GCCACGAGGG ACTTGTTGAA GAAGGAAAAA GATTGTTTGA ATCAATGTGG AGAGACCATG GGATAAAACC ACAAGTCGAG CATTATGCTT GTATGGTTGA TCTGTTAGGT CGGGCAAATA GGTTAGACGA GGCAGCAAAG ATGGTACAAG ACATGAGGAC TGAACCGGGA CCTAAGGTTT GGGGTTCCCT TCTCGGGTCT TGTAGAATTC ACGGTAATGT TGAGCTTGCA GAGCGGGCGA GTAGAAGGCT CTTTGCACTT GAACCAAAAA ATGCAGGGAA CTATGTGTTG TTGGCAGACA TTTACGCGGA AGCTCAGATG TGGGATGAGG TTAAGAGAGT GAAGAAGCTT CTAGAACACC GGGGACTGCA GAAGCTGCCT GGTCGATGCT GGATGGAAGT GAGGAGAAAA ATGTACTCAT TTGTCTCGGT GGATGAGTTT AACCCTCTTA TGGAACAGAT TCATGCTTTC TTGGTTAAGT TAGCCGAAGA TATGAAGGAG AAAGGGTACA TACCACAGAC CAAAGGAGTT CTGTATGAGC TTGAAACAGA AGAAAAAGAG AGGATAGTGT TGGGACACAG TGAGAAACTG GCGTTGGCGT TTGGGCTGAT AAATACATCA AAAGGAGAAC CAATTAGAAT CACAAAGAAC TTGCGTTTGT GCGAGGACTG TCACTTGTTT ACAAAGTTCA TCTCAAAGTT TATGGAGAAG GAGATTCTTG TTAGAGATGT GAACCGGTTT CATAGGTTCA AGAATGGAGT GTGTTCTTGT GGAGATTACT GGTAATACTT GTGGGGACTT ATACATT |
| Length | 2017 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_5: 12193726.. 12195740 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT3G46790.1 |
| Description | Tetratricopeptide repeat (TPR)-like superfamily protein |
| TAIR curator summary | Encodes a member of a PCMP (plant combinatorial and modular protein) family (PCMP-H subfamily) with 9 pentatricopeptide (PPR) repeats. The protein is involved the intergenic processing of chloroplast RNA between rps7 and ndhB, which is essential for ndhB translation. |
| Alias | [CRR2][CHLORORESPIRATORY REDUCTION 2] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 6.9282 |
Ahg487697 | transducin family protein / WD-40 repeat family protein |
| 11.4018 |
Ahg354992 | Pentatricopeptide repeat (PPR) superfamily protein |
| 13.4907 |
Ahg948276 | Clathrin adaptor complexes medium subunit family protein |
| 15.0997 |
Ahg494356 | ornithine-delta-aminotransferase |
| 15.4272 |
Ahg475389 | FAD/NAD(P)-binding oxidoreductase family protein |
| 16.5831 |
Ahg936076 | GDA1/CD39 nucleoside phosphatase family protein |
| 17.8326 |
Ahg471132 | NF-X-like 1 |
| 18.1384 |
Ahg478398 | SNF7 family protein |
| 22.8473 |
Ahg943174 | Protein of unknown function DUF106, transmembrane |
| 25.0998 |
Ahg949632 | ARM repeat superfamily protein |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|