Detail



ID : Ahg937502

Blast(Query) A.halleri   /   A.thaliana (NOT RECIPROCAL)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|937502|scaffold_501693.1
Sequence
AAAAAAAAAA ACTTTGAGAA TCATGAGAGT GTTTCTTTTA CTTTCTTTGA ATGCTCTCAT GTTACTTGAA GCATATGGTT TTACCGATGA ATCTGATAGG CAAGCGTTGT TCGAGTTCAA ATCTCAAGTT TCTCTAGGCA AAAGAGCTGT TTTGTCCTCA TGGGATAACA CCGTCCATGT GTGCAACTGG ACTGGGGTTA CATGTGGCCG CAAACACAAG AGAGTTACTC GTTTGGAGCT TGGAGGATTG CAATTAGGCG GAATGATATC ACCATCTATT GGTAATCTTT CCTTTCTCAT ATGGCTTAAT CTCTCTGGTA ACTCTTTTGT TGGTACCATC CCTCACGAGG TGGGAAACTT GTTTAGGCTT GAACACTTGG ATATGAACTT TAATTATATC AAGGGAGATA TTCCAGCCAG TTTGGCTAAT TGCTCTAGAT TGTTGGAGCT TCAGATTAAT TCAAATCATC TTGGAGGATG TGTTCCTTCA GAACTAGGGT CATTGACGAA GCTTGTTACT TTAGATCTTT ATGGAAACAA CCTAAAAGGA AAGCTCCCTG ATTTTCTAGG TAACTTAACA TCCCTTAAAG AAGTTGGATT TGGAGGTAAC AATATAGAAG GAAGAATTCC GGATAATATA GTTAGATTGA CTCGAATGGT GTATCTTGAC TTATCACGGA ACAGTTTCTT AGGTGTTTTT CCTCCCCCTA TTTACAACTT GTCCTCACTT TATGTTTTAA ACATCTTCGG TAATAGTTTC TCGGGTAGTC TAAGGGCTGA TTTTGGTAAT TTGCTACCCA ACCTTCAAAG GCTTTTTATA GGAAGGAATC ATTTCACAGG AGCCATTCCA ACTACACTTC CCAATATCTC AAATCTTCAA ATGTTGGGAA TGGAGTATAA CAATCTGACA GGAGGTATTC CTTCGAGCTT TGGAAAATTA TGGAAGTTAA AAGAATTATC ACTTCATAGC AATTTTTTGG GTAGTGGCTC TTTTGGAGAT CTTGAGTTTC TTGGTGCTTT GACTAACTGC ACCAAACTAG AAATCTTAGA GGTTGGTCGT AATAGGTTGG GGGGGTCGCT GTCAGGAGAT ATACCATCTT TTATAGGCAA CCTCACTTGG TTAGAGTCAC TCTACTTGTA CGACAATCTT TTCGTAGGAT TCATTCCTCC GAGCCTCGGT AATTGTAGTC ACCTGCTGGA ATTGTGGATT GGGGATAATA AGTTGAATGG GACTATACCT CGGGAAATTA TGCAAATTTC ACCCCTTCTT ACCCTAAGCA TCCCACGTAA TTTCTTGAAT GGCTCTCTAC CTGAAGATGT TGGGCGACTA GAAAATCTTG TTACACTATC ACTTGAAAAT AATAAATTAT CAGGACAACT TCCACAGACT TTGGGGACCT GTCTCTCGAT GGGAGAACTC TATCTACAAG GAAATTTGTT TGATGGAGCC ATTCCAGATA TAAGAGGCTT GGTGGATATT AAAGAAATTG ATTTCTCGAA CAATAATCTC TTTGGAGTTA TACCTGGATA TCTTGCAAAT TTTTCCAAGT TGCAGTATCT CAATCTATCC ATTAACAATT TCGAGGGAAG AGTGCCAACA GAAGGGAAAT TTCAGAATGC ATCTCTAGTT TCAGTATTTG GAAACAAAGA TCTATGTGGC GGCATCAGGG AGTTGCAACT AAAGCCATGC TCAAGGCAAG AACCACCAAT GGGAAGAAAG CATTCCTCTC TTTCAAGGAA AGCTGTGATA TGGGTCAGTG TAAGCATAGC TTTGCTTTTG CTGGTGTTCA TAGCTTTAGT TTCTCTACGC TGGTTGAGAA AGAGAAAGAG AAACCTCCAG ACCAATAATC CAACTCCTTC CACTATGGGG GTCTTTCATG AAAGATTAGT TATGGAGATC TTCAAAATGC AACAGATGGT TTCTCTTCAA GCATTGCTCC CTGTGGAGAA TAAGGTTGTT GCAGTCAAAG TTCTAAACAT GGAGAGACGT GGAGCAAAGA AGAGCTTTAT GGCAGAATGC GAATCCTTGA AAGACATAAG GCATCGTAAT CTTGTAAAAT TGTTGACAGC TTGTTCGAGT ATTGATTTCC AAGGAAACGA ATTTAGAGCT CTCATCTATG ATTTCATGCC GAATGGAAGC TTGGATATGT GGCTGCATCC AGAGGAAATA GAAGAGATTC ATAGGCCCTC GAGAACCTTG ACACTTCTTG AAAGGCTGAA CATTGCCGTA GATGTGGCTT TTGTTTTGGA CTATCTTCAT GTCCACTGCC ATGAACCTAT AGCCCATTGT GATCTAAAGC CAAGCAACGT CCTTCTAGAC GATGACCTGA CTGCCCATGT TAGCGACTTT GGTCTGGCTC GGCTCCTCCT CAAATTTGAC CGAGAGTCCT TCCTCAATCA ACTAAGCTCA GCCGGAGTCA GAGGAACCAT CGGCTATGCC GCTCCAGAAT ATGGAATGGG AGGGCAGCCT TCAATACATG GTGATGTGTA TAGCTTTGGG GTTTTCCTTT TGGAAATGTT CACTGGAAAG CGACCAACCA ATGAGTTATT TGGGGGAAAC TTTACACTAC ACAGCTACAC CAAATCAGCT TTGCCAGAAA GAGTTTTGGA TGCTGCCGAT GAATCAATTC TTCACATCGG TCTTAGAGTC GGTTTTCCAA TTGTTGTGTG CTTGAAATTG GTTTTTGAGG TTGGACTTAG GTGCAGTGAA GAATCTCCTA CAAACCGGTT GGCAATGAGT GAAGTCGCAA AGGAGTTGAT CTCAATCAAA GAGAGGTTCT TTAAAGCCAG AAGAACAACC CGACGTTGAA GTGTTTATGG TTTTGGTAC 
Length2829
Protein Sequence
Protein Residue
Map Locationscaffold_5: 12660503.. 12663681
Download Sequence
A.thaliana
AGI-codeAT3G47570.1
DescriptionLeucine-rich repeat protein kinase family protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
7.93725 Ahg323370 Leucine-rich repeat protein kinase family protein
18.4932 Ahg347816 Leucine-rich repeat protein kinase family protein
21.9089 Ahg351441 Lipase class 3-related protein
27.9643 Ahg887308
30.4959 Ahg937500 Leucine-rich repeat protein kinase family protein
46 Ahg311956 26S proteasome AAA-ATPase subunit RPT5B
60.3324 Ahg489963 Protein of unknown function (DUF793)
81.9146 Ahg927098 Pentatricopeptide repeat (PPR) superfamily protein
87.6128 Ahg906971
88.3516 Ahg338229
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression