Detail



ID : Ahg937685

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|937685|scaffold_501876.1
Sequence
TTAGTGCTTG TATAGAGAAC ATGGCGGCAG GTGAAATAAT CACTGAGCAG CCTCCAGAAA GCATAGTAGG ATTGATCGAG AAAATGGCAT ATGTGGTTGC ACTAAGGGGG CCGGAGTTTG AGAAGGAGAT GATAATCGTT AATAGGGGAG ATACAACTTT CAGCTTTATG AGTAGCTCAG ACCCTAATCA CGCTTTGTAC CAGCAAAAGC TTACTGAATA TCAAGGAGGT AAACCTCCGG ATTTCCAACC TAATACTCCA GCTACTCGTG AGCCTAAGGG CAAAGCACAA TCCTATGATC TTGAGCCTCC TCCCTCAAAG GAGCCTCGAT ATACCGAGAT CTCACGCAGG GAGAAGGAGC TTTGTACTAT TAAGCTCATT GCGCAGTTTG TGGCGCGGTA TGGGAAGCTT TTTCATGAGG ATTTGAAGCG TGTAGGTGTT ATGAGCCCTA TGTTTGACTT TATTAAGCCA ACTAATAGCA ACTTCGGTCT TTATAATGCC CTCGTTACTT CGTATTCACG AGTATTAAAA CCTTCCCTTG GTTCTCCCTT CTTTCTTGAT CGTATTTTCG ACCATCTTCA ATTGGAGAAG CTGGAGGAGG GAAGTGAGAC TGCTATGATT GATTTGTTTG ATTTTGTGGG TGGTGTTGAC TTTTTTGCTC ACATGGACGA TGCTCACTAT CCTGCTATCC TACCACCACC TCAACCCTTT TCAATGATAA CGCACTTGTC TGATTTGCAA GCTGATGATT CAGCTATTCA TGAGTGTGTA GGCCATGCAG AAACCAGTCT TGGGCCTCCT ACTATAAGGA TCACACCCAA GGAGTTCGGT GTTATTAAGC TCACAGCGTT GTTTGTGGCG CGGTATCGGA TGCCTTTTCG TCGGGCTTTG ATGATGAGAG TGGCTATGAA CCCTCTGTTT GAGTTTATGT TCTTTCTCCC GTCTTCTCTG AAGAAAAGAC TACTGTTTAC GGACTACCCT TCTCTGACGA AGAGAGTACT GTTTACGGAC CCTTCGTTTG GGTTTGTGGA GCCAACCGAG ATCAGGTTCA ATATTTTCAA TTTGCTTGTT GATGCGTATT CCAGAGTATT ATTCCCTTGC AAAAAGCTGA AGAAGAGTGA TGCTTGTACG AGGGCCGTTG TTGATTTTTT TCTCAAACTC CTTCACTTGG AGAGGCTGGA GGAGGGAGTG GCGGCTGCTG TGATCGATTT GCATGCTTTT GTGGGTGGTG TTGACCGTTT TGCTCACCTT GATGATGAAG ATTATTCTGC TTCCATGCCA CCACCTGAAC GCCTTTCAGT GATGATGAAC CGGGTAACAC TATCTGAGCC TGATATGCTT TTGCAGCTTC CATTGGGATC TCAGCTTGCT AGTGTTCGTA AGCAATACAA ATGTGTAGGC GATATCGATT CTTTAAGGGC TCCTACTCTA AGAAGCGTAA CATTTAGAGT CCCTGGAAAG GGGATCACAC TCAAGGAGCT TGGTATTATT AAGCTCACAG CGCAGTTTGT GGTGCGGTAT GGGTATGATT TTTGGTGTGT TTTAACGGAT AGAGTGTCTA CGAACTCATT TTTTCAGTTC TTGAATCCTT TCGATAAGCA GTTCCGTTTT TACTGTGGGC TTTTACTTGC GTACACCGGA GTGCTAAAAC CTTCTAAAAT GCTGAAGAAG CCTGATGCTT GTACGGTGGC TTTACTTGAG GGTTTTTTCC ACCGACTTCA ACTGTGGAAG CTGGAGGAGG GAGTGGAAAC GGCTATGATT GATTTGCATG CTTTTGTGTG TGGGGTTGAC TGTTTTGCTC ACATGGAGGA TGGCGACTAT TTTGCTATAA TGGATCCACC TGAACGCCCT TCAATAATGA TTAACCAGCT AATACAAATA CATACTTCAC TGGGATCTCG GCTTACTGGA TACCATGCTC AGAATCAGGG TGGAACTCAG GATATCCGAC CTGATGCTCC AGCTACTCAT GAGTGTGACA GTGTTGCACA ACGCGATCTT GAGTTTCATT CCGCCTGGGA GAAGCGTATA GTACGTAGCT ATCATTATCC CTATGTATAT GGTGGCGGGA TAACACTCGA GGAGCTTGGT ATTATGAAGT TCACAGCTCT GTTTGTGGCG CGCTATGGGA TGCATTTTTG TCAAGAATTG ATGAAGGAAG TTGTTATGAA ACCTCAGTTT AAGTTTATGG AGCCAACTAA TCAGAAGTTC AGTTTGTATA ATGTGGTTGT CGATGCGTAT TCCAGAGTAG TATACCCTTT TGATGATGCT TGTACGGAGA CAGTTCTTGA GGATTTTTTT CGCCGTCTTC AACTGGAGAA GCTGGCGGTG GAAGAAGAAG CTATGATTGA TTTGCATGCT TTTGTGAGTG GTGTTGACTA TTTTGCTGAC TTGGAAGATG TTGACTATTA TGCTTTAATG CCACCACCTG AACTCCTTTC AATTATCATG AACCGGATGC GTGGTATGCG TAAGTGGCTT CCACTGGAAT ATCGCCGTAT GTATCCTCCT ATTCCTTATA CTCATGGTCA GTGTGCAGAC GGTTGGTATC GTCATTGTCC GTGTACTCAT GGGTTTGCAG ACCCTTCAAC GTGGTTGATG CAAACTGCAG GACCCAAGGA ACCAGAGACA AAGAGACAAA AGTTTGACGA GTCAGCTCTT GTTCCAGAAG ACCAGTTTCT TGCTAAAAAC CCGGGTCCCT CTAGGATCAG GGTTGTTGTT GCAGACTCTG ATAATGAAGC CATCGAGATC ACAGTGAAGT CGTTATCGGA AAAAGTGGCA AGTTTGAAGA AGAGAATAGC TAGGGAGATC CGAATTCCAG CAAACAAACA GATGTTAAGT GGAAAAGCCG GGGTTTTAAA GGACAAGAGG TCACTTGCAC ATTACAATGT TGAAGCAGGA GAAATCCTAA CAGTGTCTCG GTGAGAAGGC TTTGTGTACA GGGG 
Length2944
Protein Sequence
Protein Residue
Map Locationscaffold_5: 13478285.. 13481319
Download Sequence
A.thaliana
AGI-codeAT3G49130.1
DescriptionSWAP (Suppressor-of-White-APricot)/surp RNA-binding domain-containing protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
44.9667 Ahg351609 Protein of Unknown Function (DUF239)
60.3987 Ahg949069 transposable element gene
70.6116 Ahg349589 Galactose oxidase/kelch repeat superfamily protein
72.3878 Ahg936571
72.5603 Ahg943128
83.5225 Ahg891101
95.3415 Ahg474922 Protein kinase family protein
99.1716 Ahg927569 Plant protein of unknown function (DUF946)
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression