Detail



ID : Ahg937784

Blast(Query) A.halleri   /   A.thaliana (NOT RECIPROCAL)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|937784|scaffold_501975.1
Sequence
ATCACAGATC TTCTTTTCAT ATGAAGAGAT CTTTCCTTCT CTTGTATGTG CTCCTGGTAC ATGCCTTCTA TGGTGCTTTG TGTAGTGTTG GAGGAAGCCT GCATTGTGAA TATTCCAATT TAGCGAGTCT TCACCGGCCT CACAGCGTAT CGATTACAGA GTTTGGAGCG GTTGGAGATG GTGTTACTCT AAACACTAAA GCCTTTCAGA ATGCTTTGTT CTACCCCAAT TCTTTCTCTG ATAAAGGCGG TGCCAAGCTT TTTGTTCCCG CTGGTCAGTG GCTTACCGGG AGTTTCGACC TTATCAGTCA CCTCACCTTA TGGCTAGATA GTGGTGCAAC GATTCTCGGG TCAACGAGCT CAGAGAATTG GCCCGTGGTT GATCCATTAC CATCATATGG ACGAGGAAGA GAATTGCCCG GTAGAAGACA CAGAAGTCTT ATCTATGGTC AGAATCTCAC AGATGTAGTC ATAACAGGCG AGAACGGGAC AATTGATGGT CAAGGAAGTG TATGGTGGGA TTGGTTTAGA AATGGAGAGC TAAACTATAC AAGACCTCAT CTTGTTGAGC TCATGAACTC TACTGGTCTG ATCATCTCCA ACCTCACATT CTTGAATTCA CCGTTTTGGA ACATTCATCC TGTTTATTGC AGAGATGTTG TTGTGAAGAA TCTCACAATT TTGGCTCCTC TTGAATCTCC AAATACAGAT GGAGTTGATC CAGACTCATC AACTAATGTT TGCATAGAGG ATTGTTACAT AGTTACCAGA GATGATTTGG TGTCGATAAA AACCGGATGG GATGAGTACG GAATATCCTA CGCAAGACCG AGCTCCAAGA TCAAGATCAA TCGGTTAACA GGTCAAACTA CTTCAAGCTC AGGAATAGCA ATCGGAAGTG AAATGTCAGG AGGTGTGTCC GAAATATATA TTAAAGACTT ACATTTATTC AATTCGAATA CCGGAATCAG AATCAAGACT TCTCCGGGAA GAGGCGGGTA TGTTAGAAAC GTTCACATCT TGAACGTGAA GCTCGATAAT GTAAAGAAAG CGATTAGATT CACGGGTAAG TACGGTGAAC ATCCTGATAA AATTTTTGAT CCCAAAGCAC TCCCAGCTAT CGAGAAAATC ACCTTTGAGA ATGTAAATGG TGATGGAATC GGTGTTGCGG GTCTACTTGA AGGTATAGAA GGAGATGAGT TTAGGAATAT ATGTTTCCTT AACGTTACTC TTAGAGTGAA GAAGAATTCG AAGAAATCTC CATGGGAATG CTCAAATGTT AGAGGTTATT CACAGTGGGT TTCGCCAGGA ATTACTTGTG ATTCTTTGAA AGAGAGTATA TTCCCGGAAC ATCGATCTGA TTGTTTCGGG TTATCGGAAA ATAATCTGGA GATATCAAGT GGTTTAAGTA GATCACCATG GTTACTTTCT TGGTGAAGTT ACTGTGAAGT TTTGAAC 
Length1457
Protein Sequence
Protein Residue
Map Locationscaffold_5: 19555981.. 19558254
Download Sequence
A.thaliana
AGI-codeAT3G62110.1
DescriptionPectin lyase-like superfamily protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
7.34847 Ahg318692 Plant protein of unknown function (DUF869)
9.32738 Ahg484077 O-Glycosyl hydrolases family 17 protein
24.98 Ahg483695 Protein kinase superfamily protein
36.0832 Ahg939518 LMBR1-like membrane protein
42.9185 Ahg318072 Protein of unknown function, DUF547
45.0555 Ahg914486 Legume lectin family protein
47.1593 Ahg930945 Phospholipase A2 family protein
47.3286 Ahg472559 Auxin efflux carrier family protein
49.2037 Ahg485763 Histone superfamily protein
52.0481 Ahg925606 Protein of unknown function (DUF565)
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression