Detail



ID : Ahg938052

Blast(Query) A.halleri   /   A.thaliana (NOT RECIPROCAL)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|938052|scaffold_502243.1
Sequence
TTAATTAAAG GTTTATTCAG CGGAATGAAG ATATATGTTT ACGATTTACC GGCGAGTTTT AACGACGATT GGGTTACGGC ATCAGACCGG TGCGCTACTC ATCTTTTTGC GGCGGAGGTA GCCATCCACC GTACGCTTCT CTCCTCCGAC GTCCGTACGT TAGACCCAGA AGAAGCTGAT TTCTTCTTCG TCCCTGTTTA CGTTTCTTGC AATTTCTCCA AATCCAACGG CTTCCCTTCT CTAAGCCATG CTCGCTCTCT CTTCAGCTCC GCCGTCGATT TTCTCTCCGA CCATTACCCG TTTTGGGATC GGACTCAAGG CTCTGACCAT GTTTTTGTCG CTTCCTAGTT AGCTCCGGTG AACGACGT 
Length368
Protein Sequence
Protein Residue
Map Locationscaffold_6: 9198050.. 9198392
Download Sequence
A.thaliana
AGI-codeAT5G22940.1
DescriptionFRA8 homolog
TAIR curator summaryHomolog of FRA8 (AT2G28110), a member of a member of glycosyltransferase family 47; exhibits high sequence similarity to tobacco (Nicotiana plumbaginifolia) pectin glucuronyltransferase.
Alias[F8H][FRA8 homolog]
Gene coexpression
MR
MR Locus Description
14.5258 Ahg487944 Exostosin family protein
26.2679 Ahg934862 Protein kinase superfamily protein
33.7639 Ahg479716 Domain of unknown function (DUF26)
43.6348 Ahg482492 Predicted AT-hook DNA-binding family protein
44.2945 Ahg495065 ethylene response factor 110
53.0471 Ahg908029 RING/U-box superfamily protein
53.0566 Ahg331706 oligopeptide transporter 9
57.0263 Ahg477611 WUSCHEL related homeobox 11
57.2364 Ahg493720 Leucine-rich repeat protein kinase family protein
61.2372 Ahg887537
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression