Detail


ID : Ahg938367

Blast(Query):  A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|938367|scaffold_502558.1
Sequence
CCAAAAGCAG CAGAAGAAAA ATGTCAGCCA TGGAAGCACT GATTCTCCAG CTCCACGAAA TCGGCGCCGT GAAATTCGGC AACTTCAAGC TCAAATCCGG AATCTTTTCT CCGGTTTACA TCGACCTCCG TCTCATCGTC TCTTATCCAT CCCTCTTAAC ACAGATCTCT CAAACTCTCA TCTCTTCTCT TCCACCTTCC GCAACCTTCG ACGTCATCTG TGGTGTCCCT TACACTGCCC TCCCTATCGC CACCGTCGTC TCTGTTTCCA ATGGTATCCC CATGCTTATG CGTCGCAAGG AGATTAAAGA CTATGGAACA TCCAAAGCTA TTGAAGGAAT CTTCGAAAAG GATCAAACTT GTTTGATAAT CGAAGATCTT GTAACCAGTG GTGCCTCTGT TCTTGAGACT GCTGCGCCTC TTCGTGCTGT GGGGTTAAAG GTTAGTGACG CGGTGGTTTT GATCGATAGG CAACAAGGTG GTAGGGAGAA TCTGGCGGAG AATGGGATTA AGTTACATTC GATGATTATG TTAACGGATA TGGTTAGGGT TTTGAAGGAA AAGGGCAAAA TTGAAGAGGA GGTTGAAGTC AATTTGCTTA AGTTTTTGGA AGAGAATCGT AGGGTTAGTG TTCCAAGTGT GGAGAAACCG AAGCCTAAGC CTAGGGTTTT GGGGTTCAAG GAAAGGTCTG AGCTTTCCAA GAATCCTACG GGGAAGAAGC TGTTTGATAT TATGTTGAAG AAGGAAACCA ATCTTTGCTT AGCTGCTGAT GTTGGAACTG CTGCTGAATT GCTTGACATC GCCGATAAGG TGGGACCAGA GATCTGTCTC TTGAAGACTC ATGTTGATAT TTTGCCTGAT TTCACCCCTG ACTTTGGCTC TAAACTCCGG GCGATCGCAG ACAAGCACAA TTTTCTCATA TTTGAAGATC GCAAGTTTGC AGACATTGGT AACACTGTCA CTATGCAGTA TGAAGGAGGC ATCTTTAAAA TATTGGAGTG GGCTGATATT GTAAACGCTC ATATAATATC GGGGCCAGGA ATCGTGGATG GCCTGAAATT GAAGGGTATG CCTCGTGGTA GAGGTCTGCT TTTGCTTGCT GAAATGAGCT CTGCGGGTAA CCTTGCTACA GGAGACTACA CTGCAGCAGC CGTGAAAATC GCAGACGCTC ATTCTGATTT TGTGATGGGA TTCATCTCGG TGAATCCGGC ATCTTGGAAA TGCGGATATG TGTATCCGTC TATGATTCAT GCAACACCTG GTGTTCAAAT GGTGAAAGGT GGTGATGCAC TTGGTCAACA GTATAACACT CCACACTCTG TGATTACTGA GAGGGGAAGT GATATTATAA TCGTGGGACG GGGAATCATA AAGGCGGAAA ACCCAGCAGA GACGGCTCAT GAGTATAGAG TTCAAGGATG GAATGCATAC TTGGAGAAAT GCTCTCAGTA GATTCGATCC TGAGAGATGG CTG
Length1473
Protein Sequence
Protein Residue
Map Locationscaffold_5: 16093649.. 16095660
Download Sequence
A.thaliana
AGI-codeAT3G54470.1
Descriptionuridine 5'-monophosphate synthase / UMP synthase (PYRE-F) (UMPS)
TAIR curator summaryencodes the bi-functional orotate phosphoribosyltransferase/orotidine-5'-phosphate decarboxylase catalyzing the fifth and sixth step in the de novo pyrimidine ribonucleotide biosynthesis
Alias
Gene coexpression
MR
MR Locus Description
10.9545 Ahg494257 Hyaluronan / mRNA binding family
15.4272 Ahg472716 Ribosomal protein L34e superfamily protein
16.7332 Ahg919605
18.6548 Ahg937058
21.7256 Ahg489026 LA RNA-binding protein
21.8174 Ahg496177 GTP binding Elongation factor Tu family protein
21.8174 Ahg938089 tetratricopeptide repeat (TPR)-containing protein
22.1811 Ahg482933 pseudouridine synthase family protein
22.8035 Ahg938554 rotamase cyclophilin 2
22.9783 Ahg486740 Carbohydrate-binding-like fold
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression