Detail



ID : Ahg938542

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|938542|scaffold_502733.1
Sequence
GTCAAATTCA ACCTCTGTAG ATGAAGAGGT CTACCAACTC AACCGTGACG TTTTCCGTCA CCGTCACCGT CGCCGTTATA TTCTTCTTCC TTTTGTCTCC CGTCACCTCC TTAGGTTCAG GCTCAACTCA CGCCGTCGTC TACGGCTCCG ACACCGTCTG CGCATTAATC TCCGGCCAAT CCACACAGCG TATCCTCTGT TACGACACCC GCCGTAGTAC CAACGTTACT CTAAACCCCG GCGTCTCATT CTCCTCAATC GCCGCCGGAA ATAATTTCCT CTGCGGTATA CGCTCCGGTG GTTACAGCCT TCTCTGTTGG GATAACATCG GAAGCTACTC TCCTAACCGT AAACGAATCT ACCAAAGCGA CACCGTTTTA CTCGAGAATC TCTCCGTCGG CGATAAACAA ATCTGCGCCA CCGTTAACGG CACAAATTCG TTAAAATGCT GGAGAGGTTC CGATCAATCA AACCCTCCGA ACGAGAGATT CCAGTCAATT TCATCCGGCG TTGGTTTCTC CTGCGGCGTT TCGATTCGAA ATAACCAAAT CCTTTGCTGG GGAACCGATC CGGTTAAATC GAATCAGATC CAAACCGGAT TCGGAAACAC GACGATGGTT ACCATATCTG CAGGTGAATC ACATGCTTGT GGATTAAACA CTACTGGGAA TTTGGTTTGC ATCGGAAACA ACGATTCTGG GCAGCTCAAT GTTCCTTCAG ATCAACCTAA CCATTACTCA TCTCTATCTC TCGGATCAAA TTTCACTTGC GCGATGCGAA TCTCGAACAG TTCGGTGGTT TGTTGGGGCG GAGGAGCAGA GAGATTCAAC AATGTCACGG ATTCGATCTC ATTCGAATCG ATTTCTTCCG GTCCGGGTCT AATTTGCGGG TTAATTTCAA GTAATCTCTC TATTATGTGT TGGAATCCTT CAAATTTCTC CAGAATCTTC CTCCCTTTCC CAGAAGTTTT ACCAGGTCCT TGCGTTGAAT CATCATCTGT TTGCTCTTGT GGTATTTATC CACAATCTGA TAAGCTCTGT TCTGGTTCTG GTTCGATCTG TAAATCATGC CTGATTCAAT TTCCGGCGAG TCCTCCGAGT CAATTACCAC TTCCACCACC GCCATCACCG CCAACTTCGT CTCCACCGTC GAAAGCTTTA ACCAGAGGAT TATTAGCGTT TGCGATCGTT GGATCAGTTG GAGCGTTTGC AGGGATTTGT AGTGGGGTTT ACTGTTTATG GACTGGAGTT TGCTTGGGAA AGAAGAAAGT TCATAACTCG GTTCAACCGA CTATAACTCG CGGCGGCTCT AATAGCCGGT CTAACAGCTC GAATAGCCGG TCGTTAACCA TAAGACGTCA AGGATCGAGA ATGCTATCAA TGAGGAGACA GAGAAGTGGA ACATCGTCGA TGAAACACGC CGATAAAGCG GAAGAGTTTT CGTTCTCCGA GCTTGCTTCG GCTACAGGAA ACTTTTCTCT AGAGAACAAA ATCGGCTCGG GGAGCTTTGG TGTTGTTTAC AGAGGCAAAC TCAACGACGG GAGAGAAGTA GCGATCAAAC GCGGGGAAGT AAACGCGAAG ATGAAGAAGT TTCAAGAGAA AGAAACCGCG TTTGATTCAG AAATCGCGTT TCTATCGAGG CTTCATCATA AGCATTTAGT GAGACTAGTT GGTTACTGCG AAGAAAGAGA AGAGAAACTT CTCGTTTACG ATTACATGAA GAATGGTGCG CTCTACGATC ATCTACACGA CAAGAACAAC GTCGAAAAAC ACAGCAGTTT GATCAATTCT TGGAAAATGC GGATCAAAAT CGCGTTAGAT GCAGCTAGAG GAATCGAGTA TCTACACAAT TACGCGGTGC CACCGATTAT TCATAGAGAT ATTAAGTCAT CTAACATCTT ACTAGACTCG AATTGGGTCG CTAGAGTTTC AGATTTCGGG TTATCGTTAA TGGGTCCAGA GTTAGGGAAA GATCATAATC CTTATCAACG TCCAATGAAA GCTGCGGGAA CGGTTGGATA TATCGATCCA GAGTATTACA GTCTCAATGT TTTAACGGAT AAGAGCGATG TGTATGGACT CGGAGTGGTG TTGTTAGAAT TGCTGACAGG AAAAAGAGCT ATATTTAAGA ACAATGGTGA TGTGGAGGAG GAGGAAGGGA GTGTTCCGGT GCATTTGGTG GATTACTCGG TGCCGGCGAT ATCGGCTGAT GAGTTGGGTA CAATTTTGGA TCCGAGAGTG GGATCACCTG AGCTAGGGGA AGGAGATGCG GTGGAGCTGG TGGCTTATAC GGCGATGCAT TGTGTGAATG CGGAAGGGAG AAATAGGCCG ACGATGACGG ATATAGTAGG GAATTTGGAG AGAGCATTGG ATTTGTGTGG GGATAGTCAT GGGAGTATCT CTAGTGGCAT TTGTTCTATT GTCTCTGATT GAGAGATTAT ATTCAAAAAA ATT 
Length2453
Protein Sequence
Protein Residue
Map Locationscaffold_5: 16742579.. 16745016
Download Sequence
A.thaliana
AGI-codeAT3G55950.1
DescriptionCRINKLY4 related 3
TAIR curator summary
Alias[ATCRR3][CCR3][CRINKLY4 related 3]
Gene coexpression
MR
MR Locus Description
19.2614 Ahg493614 PLANT CADMIUM RESISTANCE 2
44.4072 Ahg475116 WRKY family transcription factor
46.1519 Ahg484411 plant intracellular ras group-related LRR 2
50 Ahg941373 Plant protein of unknown function (DUF946)
51.3517 Ahg915669 Glutathione S-transferase family protein
55.4977 Ahg495340 Heavy metal transport/detoxification superfamily protein
66.4078 Ahg475766 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
70.484 Ahg327678 cyclic nucleotide-gated channel 13
72.7049 Ahg483400 NAC domain containing protein 42
76.9545 Ahg313260 formin homologue 4
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression