Detail



ID : Ahg938556

Blast(Query) A.halleri   /   A.thaliana (NOT RECIPROCAL)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|938556|scaffold_502747.1
Sequence
TTGAAGGTGG TCGAGAGAAG CATGGCAAGT CACTCGAGAA AGCTGAGCTT GTCATGGGCT GGAGATATGT ATGATCCTCT ACCCTCCATT GTCTCTCACA CAAGAAGCAA GAAACAGCAA CCGCAGAAAT CAAAGAGCAA AGACAATCTG AAGATGAATG GAAAGAAAGG ACTTAAGGGA ATCAGCAAAG ACAAGAAGCA GACTTCTTCT TGCAGCAGCA AATACAATCG AGAGATGTTA CACAAATGTC TATTAAAGCC GCATCTTCTT GAATCTGACC AGCGCGGCAC TTGCGTCTTC TCTGTCGCTC TCTCTTGTTT ATAAATAAAT GATTTTGGTG TGAA 
Length344
Protein Sequence
Protein Residue
Map Locationscaffold_5: 16807792.. 16808135
Download Sequence
A.thaliana
AGI-codeAT3G53668.1
Descriptionconserved peptide upstream open reading frame 51
TAIR curator summaryUpstream open reading frames (uORFs) are small open reading frames found in the 5' UTR of a mature mRNA, and can potentially mediate translational regulation of the largest, or major, ORF (mORF). CPuORF51 represents a conserved upstream opening reading frame relative to major ORF AT3G53670.1
Alias[CPuORF51][conserved peptide upstream open reading frame 51]
Gene coexpression
MR
MR Locus Description
6 Virus1061
6.48074 Ahg932731
6.63325 Ahg925942
8.24621 Ahg475769 N-terminal nucleophile aminohydrolases (Ntn hydrolases) superfamily protein
12.49 Ahg337814
13.2665 Ahg906167 Phosphofructokinase family protein
14.1421 Virus0511
16.7929 Ahg952015 Zinc finger (CCCH-type/C3HC4-type RING finger) family protein
21.8174 Virus2890
24.0832 Virus1475
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression