Detail



ID : Ahg938811

Blast(Query) A.halleri   /   A.thaliana (NOT RECIPROCAL)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|938811|scaffold_503002.1
Sequence
AAATGGTGAG AGCCCATTGG ATGGCTCTCA CCATTGGAGA TGCTCTTAGC GATTCGCATA CCTCGTGTGC GTTACTCGAA ATCAGTCCCA TATTTGATTG CATGGAGTCT TCATTAATGG GGAATCGAGT TGATAATAAG AAGTTTACTT GGGTGATTAA GAATTTTTCC ACTTTGCAAT CTGAGAAAAT CTATTCAGAC AAATTTGTGA TCAGCGGCTG CAAATGGCGT CTTTTAGCCT TTCCCAAGGG AGATAAAGTC AAATGTTTAT CTCTGTATCT TGAAGTTGCT GATTTTAAAT CCTTGCCTTC TGGATGGCGA AGAAACGTAG AATTTACGAT AACTCTAGTA AAACAATTTT GTGAGAAATT CTCACTAGCG AAAGTAACAC AACATTGGTT AGACCACAAG GTACCAGACT GGGGTTTTAA ATCCATGATT CCCCTTACCA CACTTCATGA CAAGGATGGT GGGTTTCTTG TGAACGATGA ACTCAAGATT GTTGCTGAGG TCGATGTTCT TGAAGTTATT GGCAAACTAG ATGTACCCGG GGAATCTGAA GAGGAAACCC AACCTGTGAA AAAGATAAAG CAGAATGATG ATGGTGCGGT GTCTAGTGAT CTGCTTAAGG AGATTCCAGG AGATTTGGTG GATGTCAATG GGTTTCAAGT TCTTCCTTCA CAGGTGGGTT TTGTGAGCCG TATTTTTGAA AAACACCCAG AGACTGCATC AGAATGCCGT ACAAAGAACC AAGATCTGAG AACATCATAC ATGAATGTCC TCATAAGCGT AATCAAGATG CTCTTCAAAG GACCTGAGGA ACACTCCAAG GATGATCTGT CTGATGCAGA AGCTGCTCTG GCATACATGA CACATGTAGG GTTTAAGTTG GATTGGTTGG AGAAACAACA TGAAGAAGTA AAAGAAAGAA TGAAGAAATG TGCCCGGGTG TGTGAAATAG AGAAACAGCT GCATGACTTG GAGCACAAGT GCAAAGACCT AAAAGCTCAG CTGAATAAAG AGAAGGCGGA GATTTTGGAG GCAACAGCTC CTGATCTTTT TTTCATTGAT GTTGTTTGAT GACTTATGGT CCTAGGGAC 
Length1099
Protein Sequence
Protein Residue
Map Locationscaffold_5: 17755594.. 17757287
Download Sequence
A.thaliana
AGI-codeAT3G58240.1
DescriptionTRAF-like superfamily protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
11.225 Ahg476218 MLP-like protein 31
12 Ahg487547 RING/U-box superfamily protein
15.9687 Ahg481709 BEL1-like homeodomain 8
20.9762 Ahg888873 Pectin lyase-like superfamily protein
22.2711 Ahg937675 Protein of unknown function (DUF677)
25.0998 Ahg907325
32.249 Ahg314052 seryl-tRNA synthetase / serine--tRNA ligase
34.5543 Ahg894592
41.2916 Ahg900404
44.3847 Ahg337131 basic helix-loop-helix (bHLH) DNA-binding superfamily protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression