| Annotation |
|---|
| Description | jgi|Araly1|938914|scaffold_503105.1 |
| Sequence |
GAGGAACTAA TAAACGGACC ATGAGCTCCA CCCAGACATA CGAGCCGTTA TTGACTCGAC TCCACTCCTA TTCTCAGATA ACTGAACGGT CTTCGCCGGA GATAGAGGAG TTTCTACGCC GTCATGTATC CACGGTGACG CCACGGTGGT GGCTAAAGCT GGCCGTGTGG GAGTCAAAGC TTCTATGGAC ACTCTCTGGA GCCTCTATAG TGGTCTCTGT TCTGAATTAC ATGCTCAGCT TCGTCACCGT CATGTTCACC GGCCATCTCG GTTCTCTTCA GCTCGCCGGC GCTTCCATCG CCACTGTGGG CATCCAAGGT CTAGCTTACG GTATCATGTT GGGAATGGCG AGCGCGGTCC AGACAGTGTG TGGTCAAGCG TACGGAGCGA GACAGTACTC GTCAATGGGA ATAATCTGCC AACGAGCCAT GGTCTTGCAC CTTGCAGCTG CATTCCTCCT CTCGTTCCTC TACTGGTACT CGGGTCCAAT CCTAAAAGCA ATGGGCCAAT CCGTAGCCAT AGCACACGAG GGTCAGATCT TTGCACGCGG AATGATTCCA CAGATTTACG CTTTTGCCCT CGCTTGCCCG ATGCAGAGGT TTCTTCAAGC TCAGAACATA GTGAACCCTT TGGCTTACAT GTCTTTAGGA GTTTTCTTGC TCCACACGTT ACTCACGTGG CTGGTTACCA ACGTGCTGGA TTTCGGCTTG CTTGGTGCGG CTCTGATTCT CAGTTTCTCA TGGTGGCTGC TTGTGGTTGC GAACGGTCTG TATATCGTGA TGAGCACGAG TTGTAAGGAG ACTTGGACCG GGTTTTCAAC TAGGGCATTT ACAGGGATAT GGCCTTACTT CAAGCTCACG GTAGCTTCAG CAGTCATGCT ATGTTTGGAG ATATGGTACA ACCAAGGGCT AGTGATTATC TCTGGTTTAC TCACCAATCC GACAATTTCT CTAGACGCGA TTTCGATTTG CATGTATTAC TTGAATTGGG ATATGCAGTT CATGCTTGGT CTAAGTGCAG CAATCAGTGT GCGAGTGAGC AATGAGCTAG GAGCGGGAAA TCCACGAGTG GCTAAGTTAT CAGTAGTGGT GGTTAACGTT ACGACGGTTC TCATTAGCCT AGTTCTCTGT GTCATTGTGC TCGTGTTCCG CGTCGGCCTT AGCAAAGCTT TCACGAGCAA CGCAGAAGTT ATAGCAGCCG TCTCTGACCT CTTTCCTCTT CTCGCCATTT CCATTTTTCT AAACGGAATC CAACCAATTC TCTCAGGGGT TGCTATTGGG AGTGGGTGGC AAGCAGTGGT GGCCTATGTG AATCTTGTTA CTTACTATGT CATTGGTCTT CCTATTGGCT GTGTTCTTGG CTTCAAAACT AGTCTTGGAG TTGCTGGGAT CTGGTGGGGG ATGATTGCAG GAGTCATACT TCAAACCCTA ACTTTGATTG TTCTTACACT TAGAACCAAT TGGACTTCCG AGGTAGAAAA TGCAGCTCAG AGAGTAAAGA CCTCGGCAAC TGAGAATCAA GAGATGGCTT ACGAAGGCAT TTAAGAGAAC AGCAACAGCG ACTGTT |
| Length | 1566 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_5: 18115601.. 18118050 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT3G59030.1 |
| Description | MATE efflux family protein |
| TAIR curator summary | Encodes a proton antiporter. Involved in the transportation of proanthocyanidin precursors into the vacuole. In vitro transport experiments showed that cyanidin-3-O-glucoside (anthocyanin) was an effective substrate, whereas the proanthocyanidin precursor epicatechin was not transported. However catechin-3-O-glucoside inhibited anthocyanin transport in a dose-dependent manner suggesting that glycosylated epicatechin is the in vivo substrate. Recessive mutation has strong reduction of proanthocyanidin deposition in vacuoles and has reduced dormancy. Expressed in the endothelium of ovules and developing seeds. |
| Alias | [ATTT12][TT12][A. THALIANA TRANSPARENT TESTA][TRANSPARENT TESTA 12] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 4.47214 |
Ahg952026 | |
| 6.32456 |
Ahg906590 | Cysteine/Histidine-rich C1 domain family protein |
| 9.53939 |
Ahg924343 | F-box associated ubiquitination effector family protein |
| 14.8997 |
Ahg936571 | |
| 27.2029 |
Ahg891786 | Protein of unknown function (DUF1336) |
| 29.1204 |
Ahg482492 | Predicted AT-hook DNA-binding family protein |
| 31.1127 |
Ahg335722 | myb domain protein 117 |
| 33.9117 |
Ahg486501 | uclacyanin 3 |
| 39.2683 |
Ahg937789 | Pectinacetylesterase family protein |
| 41.6413 |
Ahg338146 | KNOX/ELK homeobox transcription factor |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|