Detail



ID : Ahg939010

Blast(Query) A.halleri   /   A.thaliana (NOT RECIPROCAL)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|939010|scaffold_503201.1
Sequence
CTAATCATTT AAGTGGTTTC ATGCATGGTC TCAAGAATAT TGAGTCCTGG GATCGAGATA GGGAAGCTTA CCTGGAGCAG GCTGACATGG AGTCAGAGCA AGCTAAAAAA TATGTCCAGA AAGGCGACGA AGAAGCTGCC AAATACCATT TGAGCCTCAA GTTGCTAGCC AACCGTTCTG CTCAACATTG CCAGGAATTA CTGCTTCATT CTCACAAACA AATAGTGAAC CTTCATCATA TGTTGTCTAA GGCAGTGATT AAGTGTAATC CGAGTGTCTT GTGGTGCTAC AAGGACAAAC TTGACATCAG CAGCTGTGCT CTGAGTCCAT CTCTGACGTG TTCCATGCTC TTGATATTTT TCATGCAGTA TATACAACCA CAGGAGCATG AGAAGCTCTC ACAAGTAGAG CTGTTGGTTA TTGATGAAGC GTCAGCTATT TCTTTGCCAG TTGTGGTGAA GTCTTTGCTA GGTCCTTATC TGGTTTTCCT ATCGTCAACT GTCAGCGGGT ATGTAAAACA GGATGTGATG CTATTAAAAA AGTCATATGC ATGTTCTGGT TTTAATTCAG GGTTAATCAT GCTACTGAAT TTTACCCTTT TTTGTTTTTA TGTTTACAGC TATGAAGGCA CTGGGAGATC TTTGTCCCTG AAATTCCTCC AACAATTAGA TGAGCAAAGC CGGGCTCCTG CTACTGGTCT TGAAGGGTCT CTTTATGGAA AGATATCTGA GAACTCAGCC CTTCAAAGTT TAAGGGATGG CCATTCACCA TATGGAGACC AAATTCCATG GAAATTCTGT GAACAATTCC GGGATACTGA ATTTCCAGGT TTCTCTGGGG CTCGGATAGT TCGCATAGCA GTCTACCCTT ACGCCATGAA GATGGGATAT GGTTCTGCTG CAGTTGAACT CTTGAGCAGA TATTTTGAGG GTCAGATAGC TCCAATCTCA GAAGCTGATG ATAAAGTTGA TGTGGAGCAT GCACCCATTA AAGTCGCAGA GGCTGCGGAG AAGGTCTCCA TGCTCGAGGA GCAAGTAAAG CCTCGCACAA ATCTTCTCAT GATCGACTAC CTGATAAGCT CCACTACATT GGTGTTTCCT TTGGACCTCT TCCGATTTTG GAGAAAACAT AATTTTGCGC CATTCTACGT TAGCCAAATC CCAGCTGAGA ATATTTCCAT CCGTTCTTCC TTAATCATGG ACTATAAACT TGCAATGAGT GTCTTAAACC CCAACATCAA CTTCCACGAG GTTGATTCTT CAGGGAGTTC ATCAGGTGGA TTTTTGAAGA GACTCGACGG CATATTATCT CCGTATGATA TGGAGAAGTT TATGACATCT GCAAAACGCT GGCACATCAG TATTTTGAAG AGAAGCTCCC CATATGACTG TCATATGTTC AGGCATCTAT ATTGCTATGC TTGGGGTTGC AGGAGGCGGA CTTCTCTAGC ATCGAGGTTG CAAGGGAGTT GTGCAAATGG AGTTGCGGGA AAGGAGATCG AATCAGCCCT CCCTCGTTTG AAAGAGAGAG AGCTTGAACC GGGCAATGTA TCGGTCGACT ATGGTATCAG GGAAGGAGCA ACACAAGTCG AGGAACAAAT GATGAAGGAG AAGGTTGAAG GATTAATGGA TTCTGAGCTT CAACAATATG TAACAGGGGA CAAAGAAGCA GAGGCTCTGC AACATTCAAA GATCCCTTCA AGTGGTATTA TCAGTGTGTT AAGTCCACTG AATCGGAGAA TGAGAATGGG TTTTGACAAA TCCACTAAAA AGAGAAGCAG TGAAGAAGAG CCTGAATATT GAGTTTATAT CTCGGTTTAT GACCG 
Length1825
Protein Sequence
Protein Residue
Map Locationscaffold_5: 18461434.. 18466506
Download Sequence
A.thaliana
AGI-codeAT3G57940.1
DescriptionDomain of unknown function (DUF1726) ;Putative ATPase (DUF699)
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
4 Virus1001
7.81025 Ahg902495 Galactose oxidase/kelch repeat superfamily protein
18.9737 Ahg905205 LOB domain-containing protein 9
21.5639 Ahg926488
24.98 Ahg913105 ATP-dependent helicase family protein
27.2029 Ahg952184
30.692 Ahg952413
31.8119 Ahg333073 Ycf1 protein
33.8821 Ahg482123 low-molecular-weight cysteine-rich 75
34.0588 Ahg358290
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression