Detail



ID : Ahg939564

Blast(Query) A.halleri   /   A.thaliana (NOT RECIPROCAL)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|939564|scaffold_600108.1
Sequence
TTCTCATTCG TCTGATCTAC AATGGCTCAG AGTTCTACGG AACCAAAGGT TAGTTTGAGA CTTATCATTG ATGAAAAGAA AAACAAGGTC GTTTTAGCCG AGGCTGGTAA GGATTTTGTT CAAGTTCTCT TCAGTTTTTT GACATTACCA ATGGGAACAA TCGTCCGACT GCTTGGGAAG CATCAAGTCT CTGAGCCAGT TACCGTTGGA TGTATTAGCA ACCTTTATAC AAGTGTTGTG GACATGAAAA TTGATGATTT TGAGACTGAA GCTTGTAAGC AGATGTTGCT TTATCCCAGG AATTACGTTA GGGAAGCTCA ATGCAGAAAG TTTAAGCTCA ACATAAACCC TACTGAAAAC TTCAAGTGCT TTGGGTGCAG CTCTTTCCCT AGCTGCTCAA TGTGCAGTAA TTTTAACACC TCCCGATGTA GGTGCGGTAA GTTGATGACC AGGGAGATTG ATTTACTAGA AGATGAGGAG GTCATTGTAG GCATCATGCA AAATGATCTC CGTGGAGTAT TTATCAGAGA CAGGTCGTCA TTTATCATAA CCGACGACTT AAAACTGACA GTTGACTCTA CTAGTTCTCT CTTGCAAACG CTCAAGGCTC TTGGTTTTTC TGATGTTAGT AAGCTGAGAG AACGGGTTCT TGATATCGGT CTCAAAGAGG TTTTGACTTT GCTGCGATGT GTATTCTCCT CAAGTTCTCC CTTGACAGAC ACTTTCTTGA AGAATCAAAG TTTACACAAG GTGAGGAAGA TTTATAAAAG GCTGAGTCCA TGCTTGGAGA AGAACGGAGA TGAAGCAGAA CAAGACAAAG TAATAACTTT TGATGCAATA GTAAGGAAAC AGGACATGAA GATTTTGTAT GTTGAGTGCC GTGAAGACTT TGTTGATCTT CTTTTAACTT TTCTCGCCAT TCCACTGGAA TCTATATGGG AAGTCTCTGG CAACCATATT AGTTTAGGAT GCGTTGGGAA CTTAAGCAGA AGCTTCAAGG ACTTGAGTGA TAATGAAAGG ACACAAGTGT CAAATCCGAA ATTCGTGCTT CCGTATTACT ATAGTTGCCA GAATCAGTTG CTCAATATCA TCACTTTCAA ACCACAGTTT TACGTAACCA TCAATAGGGA CATTTCCAGA CCGTTGTGCT GTGTGACTAC AAAGCCAACC TTTATACAAG TGAGTTTTAT TGATCCAAAA TACAATGGCC ATCATTCAGT TTCAACAGAA GGTAGTGGTG GTTTCATGAA GAGAGATTCA AAGTTTACGG TATCAGATGA TCTGGTTATT GCACCTAAGA ACACTACTTC AACCTTTTGG GCATTAAAGA AGCTGCAGAT TCACACTAAC GATATAGAGG TGCAAAAAGT TAGCATCAGC AAAGCTCATG CTTTGAATCT GTTGAGAGCT TCAGTGGTGA CATCCTCTGC TTTGAGCTCT GCTTTTGGGA ATTTGATTGT AAAGAAACCC AAGGAAGAGA ATGTTTCATG GAACCCGGTT TCAAAGAAAC TAAAGGTAGA GACTTGAAGA AACACAAAGG TGGAGAG 
Length1547
Protein Sequence
Protein Residue
Map Locationscaffold_6: 404758.. 406487
Download Sequence
A.thaliana
AGI-codeAT5G01140.1
DescriptionProtein of unknown function (DUF674)
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
5.91608 Ahg926289
9.16515 Ahg354856
9.94987 Ahg335228 cyclic nucleotide gated channel 8
10.8167 Ahg941717
11.4018 Ahg314116
11.6619 Ahg939352
16.1555 Ahg484573 Gamma-thionin family protein
16.6132 Ahg492880 Toll-Interleukin-Resistance (TIR) domain family protein
17.1464 Ahg918648 Cysteine/Histidine-rich C1 domain family protein
17.6635 Ahg355832
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression