Detail



ID : Ahg939618

Blast(Query) A.halleri   /   A.thaliana (NOT RECIPROCAL)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|939618|scaffold_600162.1
Sequence
CTTCCAAAAT ATTGATCTGT AACCCATGGA TTTCATTCTC AAACTCTTTG CACTTCTAGT CTCATTCTCT TTTGTGCAAT CCCGAGAAAC TACTAAAAGT TGGAAATCTA TCAAGTTAAA TGAGAAGATG ATATATGATT GTGTGGATAT TTACAAACAA CCTTCGCTAA ATCATCCACT ACTCAAAAAT CACAAAATTC AGATGGAACC ATCTTTTCTA ATCCCTAAAT CAAAAAATCA AGTCGAACGC AAAATATTCA AAACAATCAT CGATTGTCCA AACGGAACAG TTCCTATATT GAGACACACA AAAGAGTATG TTGCAAATGC CCAATATTTT GGAGAAAAGC ATTTCAATCC GTTCACAATG CAAAGTCATG GAATACATTT TGCCGGAGTT AGATTGAAAG GCAACGGTCA GAGTCCTTTC TATGGTACAG CATCTTATAT AAGTGTACAT GACTTAAACG TTAGTCGGGA CCAAGTTTCA TATGCTCACG TATATGCTGG CAGTCGAGTA AACAACATAG ATAATTTTAT TGAAACCGGT TGGATGATAA ATCCAAGTTT ATTTGGTGAT GGACGCGTAT GGGGTTATGG ATATTTTAAG GGTGCCAATG GGACAGGGTG TTATAATACA GTATGTCCTG GTTTTGTTCA AGTGTCAAAA AGAGATCTTA TAAGTGGGCC TTTACCTGAA GCTCCTGAAG GTAAAAGAAA CATTGGTTCT AATTTTCAAC AGGATAAAAA AACAGGAAAT TGGTGGGTAT CAGATATAAA AAACGTAGGA AAAGATATAC ACATTGGTTA TTGGCCAAAG GAACTATTTG ATGTGATAAG TGATGGTGTG AATATTGTTG GAGTTGGAGG AGTAGTCAAG ACTTCTCCTT CCGGCAATAG TCCACCAATG GGTAATGGTC ATCGACCAGA AAAGGATAAA GATGATATGG CGTCAGCACG CGTTCGAGAC CTTCTCGTCA TTGATTCTAG TTACAAGTTC AAGAGAAGTA AAAGATCTAA ATTAGAATAT TTATTAGACA ATGACAAATG TTATGGATTG AGAAAGGGAA AAGAACATTT GTTTCTGTTT GGTGGAGAGG GAGGAGATTC TTGTTGAATC TAACATTACA AAAGAAATT 
Length1139
Protein Sequence
Protein Residue
Map Locationscaffold_6: 600979.. 603386
Download Sequence
A.thaliana
AGI-codeAT5G05030.1
DescriptionProtein of Unknown Function (DUF239)
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
5.47723 Ahg901120 isopropyl malate isomerase large subunit 1
5.65685 Ahg473646 general regulatory factor 11
8.7178 Ahg485736 FBD-like domain family protein
10.0995 Ahg317904
15.5885 Ahg481923 Lateral organ boundaries (LOB) domain family protein
16.4317 Ahg470713 ovate family protein 4
16.7332 Ahg347378
17.5499 Ahg489019 Uncharacterized protein
20.0499 Ahg494722 Protein of unknown function (DUF784)
20.445 Ahg916302
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression