Detail



ID : Ahg939640

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|939640|scaffold_600184.1
Sequence
AAGCAAAAGA GATACAAAAC ATGTTGTGTG CTTCTCAAGC ATCAACAACG ACCCTTTGCT CAACCATGGA CCAAACCTCA CAACCTTCAT CTTCCTCTTC ATCCGCAATC CGGCTTGGTG GTCGAGCCAT CGATCGTCAT AACCCAATCA TACGTGACGG TCGGAGACTG ACTCCTCCAC CTTCTCCAAG CCTTAATCCA TCTTCTTCGT CTTCTTCTAC TTATCATACT CCTCTTATGA CTAGATTAGG TCTTGAGAGT AGTGAGCAAA AACGTGTAGC GAAGAGGAAG AGCAAGAAAG GTGACAGTGA CGTTGGTAAG TCACCGGTTA GTTGTTTTAG CAGTGACACT CCTCAGGGTT CTTCAAGGTA CTTATTGAGT AACCCGGTTT TCTTTGACGG GTTTGTGGAT TCCGAACCGA TTCCACTACC TATTGATGAA CCGGAGATAA CCAAAGCTGA TGATTTGGAT AATCTTCATG AAGAGCAACT GATTATAAAC GCCTCAAAGT ATCTATCAAC TTCTGCGTCT TTCTTGGAGA AGAAGCAACC CGATTTCTTT GAGGGGTTCT TGGATTATGA ACCGGTTCTG TCTCCGGATA ATCCTTTCTC TGAACCCACA AAAGCTTCTC CTACAGCATC TCTGAGCTCT CTTGAAGATA AAGATGTTAC GTCCCCGGAT TTCAAATTCT CTCCTCCTCC TCCACCACCT CCTTCTCCTC CTCCGTCTTC GCCGCCACCA CCACCAGTGA AAAACTCGTC TTCCGATCAA GTGGTTGTTT TGAGAGTGTC ACTTCATTGC AAAGGCTGTG CAGGGAAAGT TAAGAAACAT CTATCGAAAT TGAAAGGAGT GACGTCGTAT AACATAGACT TCGCAGCAAA GAAGGTTACC GTGACGGGAG ACGTGACGCC GTTAACTGTG TTGGCGAGTA TTTCCAAAGT TAAAAACGCA CAGTTTTGGC CTGAGATTAT TCAGAAGTAA TTCCTTTTTT TTTTCTCTGT 
Length1000
Protein Sequence
Protein Residue
Map Locationscaffold_6: 687618.. 688836
Download Sequence
A.thaliana
AGI-codeAT5G02600.2
DescriptionHeavy metal transport/detoxification superfamily protein
TAIR curator summary
Alias[NAKR1][NPCC6][SODIUM POTASSIUM ROOT DEFECTIVE 1][nuclear-enriched phloem companion cell gene 6]
Gene coexpression
MR
MR Locus Description
33.0908 Ahg492401 phosphoglucan, water dikinase
54.3507 Ahg486064 copper chaperone
69.3542 Ahg480557 ubiquitin-conjugating enzyme 29
69.857 Ahg351234 Protein of unknown function (DUF3049)
74.5989 Ahg314496 MATE efflux family protein
77.4984 Ahg474732
79.975 Ahg490488 TRAF-like family protein
81.0432 Ahg494661 type one serine/threonine protein phosphatase 6
81.2896 Ahg477311 ACT domain repeat 6
83.1625 Ahg470618 LisH and RanBPM domains containing protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression