Detail



ID : Ahg939816

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|939816|scaffold_600360.1
Sequence
AAGAACCAAA AGATACTTCA ATGGCGCAAA CTACTGTCAC TGTAGTCGCG ACCAAACGCG ATGCTCTTGA TCCTTACATC AAGATTCTTC AGAATCGGTC AAACGACATC GATGTTTCCT TCTCTTCGTA CCTCAAGCCA GACAACAACG GACAACAACA AAAGGAGAAT GACGATACTG AGCTAAGCAT CTTCGAAGCT CGAAGTTACT TTAGCGAAAA TGGAAGCAAC GATGGATGCC AGATGAGGAA TCTAAGTGGT CCAAGATTCT CATCTGTTTC ATCTGCAAAA GTGTCTTCTT TTACCGTGGG ACAAACGGCA TCGTCTGAAG CTAGCTGGAA CAGCCAAACC GGTTTGCTCT CTAACAAAAG CCGCCAAGGA TCGGCCCGAG ATGGACGTAG AAGCAGCAAG AAAGGACCCA GATGGTTTTT TAGACGCAGG ACTTGTCCCT GTTCTAGCTC TAAGTCGGTT CAGGTCCAAG AATCCAAACC AAGAATCGCA GTGCCCAAAA CCGGTTCTGA CCGAGTCGTG TCGAACCGAA TCGTTCATAG TCATCAGACG ATATCTTCGC CTGAGCCAAT AAGATTAACA ATCCCTTCAA ACACTGTGAC TCGGTCCGTA GATTACGCAG CAAACAGAGA AGCTAGAGCT CCGGTTAGTA ATTTTAGCTT CCCAACTCTA AACGAAACTT CACAATCATC AGAAAATCCC AAGAATCCGG TTTTGGTTCG AATTGAACCG GTTCTGCTTC CGATTAAACC GGTTCTGAAT CCTACGAGTC CCAAGGGAGT CATCATAGAC GAAGAAGCCA CGAGCGACGC TAGCTCCGAT CTTTTTGAGA TAGAGAGCTT CTCTACTCAA CCTGCAGCTC GTCCATGGGC TCCACCAGTA CGGGTCTCGA TAGACGAGAC CGTGTCTGAG TACGGTTACG AGCCAAGCGA AGCAAGTGTT ACTTGGAGCG TTATGACCGC CGAGCCGGCC TCCGCGGTTG CAGCTAACTT CTCAAGAATC GCCTTGTCGT CCTCGTCGAC GGCGTTTAGT GGTTACGATA AGAGGAGAAC CGGTTTGTTG AACTGTCACT GTGAGAAGGC GGTTATGGTT AGTGACATTC AAAACGACTT CGCGGGAAAG GTGTTGTGCA GCAATGGCAA TTCTAAACTA AGCGTGACGA GTAGACCAAG GCAATGATGG ATACCAAATC TTATTTC 
Length1207
Protein Sequence
Protein Residue
Map Locationscaffold_6: 1308025.. 1309273
Download Sequence
A.thaliana
AGI-codeAT5G04190.1
Descriptionphytochrome kinase substrate 4
TAIR curator summaryEncodes phytochrome kinase substrate 4, a phytochrome signaling component involved in phototropism.
Alias[PKS4][phytochrome kinase substrate 4]
Gene coexpression
MR
MR Locus Description
14.6629 Ahg936905
26.3439 Ahg923546
31.749 Ahg887694 Plant invertase/pectin methylesterase inhibitor superfamily protein
33.5261 Ahg922616 Class II aminoacyl-tRNA and biotin synthetases superfamily protein
38.0789 Ahg334324
50.0799 Ahg921366
52.8772 Ahg330262
53.8888 Ahg915673 Protein with RNI-like/FBD-like domains
64.3117 Ahg936433
64.4127 Ahg895572
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression