Detail


ID : Ahg939830

Blast(Query):  A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|939830|scaffold_600374.1
Sequence
TCTTCTTAAA CTCAAAGATA ATGGCACTTG AAGCTCTTAG TTCTCCAAGA TTAGCTTCTC CGATGCCGAC TCTGTTTCAA GATTCAGCAC TAGGGTTTCA TGGGAGCAAA GGCAAACGAT CTAAGCGATC AAGATCTGAA TTCGACCGTC AGAGTCTAAC GGAGGATGAA TATATCGCTT TGTGTCTCAT GCTTCTTGCT CGCGACGGAG ATCGAACCCG TGACCTTGAC CTGCCTCCTT CTTCTTCTTC ACCTCCTCTG CTTCCTCCTC TTCCTTCTCC GATCTACAAG TGTAGCGTCT GTGACAAGGC GTTTTCTTCT TACCAGGCTC TCGGTGGACA CAAGGCAAGC CACCGGAAAA GCTTTTCGCT AACTCAATCA GCCGGAGGAG GAGGAGATGA GCCATCGACG TCGTCGGCGA TAACCATGTC TGGTATCTCC GGTGGGGGAG GAGGAAGTGT GAAGTCGCAC GTTTGCTCCA TCTGTCATAA ATCGTTCGCC ACCGGTCAAG CTCTGGGCGG TCACAAACGG TGCCACTACG AAGGTAAAAG CGGCGGCGGC GGGAGCAGTA GCGTGTCGAA TTCTGAAGGT GTAGGGTCCA CAAGCCACGT CAGTAGCGGC CACCGTGGGT TTGACCTCAA CATACCGCCG ATACCGGAAT TCTCGATGGT CAACGGAGAC GAAGAGGTGA TGAGTCCCAT GCCGGTGAAG AAACTCCGGT TTGACTTCCC GGAGAAACCC TAAACATATA CCTCTCTCTA GGA
Length763
Protein Sequence
Protein Residue
Map Locationscaffold_6: 1380022.. 1380790
Download Sequence
A.thaliana
AGI-codeAT5G04340.1
Descriptionzinc finger of Arabidopsis thaliana 6
TAIR curator summaryputative c2h2 zinc finger transcription factor mRNA,
Alias[C2H2][CZF2][ZAT6][COLD INDUCED ZINC FINGER PROTEIN 2][zinc finger of Arabidopsis thaliana 6]
Gene coexpression
MR
MR Locus Description
3 Ahg472978 salt tolerance zinc finger
5.91608 Ahg938735 calcium-dependent protein kinase 32
9.16515 Ahg473051 ERF domain protein 11
11.5326 Ahg489075 Polynucleotidyl transferase, ribonuclease H-like superfamily protein
11.8322 Ahg486038 salt-inducible zinc finger 1
11.8322 Ahg472633 Protein of unknown function (DUF1645)
12.083 Ahg474828
12.7279 Ahg485608 syntaxin of plants 122
12.9615 Ahg910871 Protein of unknown function (DUF761)
13.2665 Ahg950731 C2H2-type zinc finger family protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression